STRINGSTRING
VPS54 VPS54 VPS51 VPS51 ARFRP1 ARFRP1 COG1 COG1 RIC1 RIC1 RAB34 RAB34 SMIM7 SMIM7 COG4 COG4 SYS1 SYS1 COG3 COG3 TGOLN2 TGOLN2 VPS52 VPS52 COG8 COG8 COG5 COG5 TMF1 TMF1 COG2 COG2 RAB36 RAB36 EIPR1 EIPR1 RGP1 RGP1 VPS53 VPS53 COG7 COG7 VPS50 VPS50 COG6 COG6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
VPS54Vacuolar protein sorting-associated protein 54 isoform X1. (977 aa)
VPS51Vacuolar protein sorting-associated protein 51 homolog. (781 aa)
ARFRP1ADP ribosylation factor related protein 1. (201 aa)
COG1Component of oligomeric golgi complex 1. (960 aa)
RIC1RAB6A-GEF complex partner protein 1 isoform X1. (1422 aa)
RAB34Ras-related protein Rab-34 isoform X1. (268 aa)
SMIM7Small integral membrane protein 7. (104 aa)
COG4Conserved oligomeric Golgi complex subunit 4. (788 aa)
SYS1Protein SYS1 homolog isoform X1. (156 aa)
COG3Conserved oligomeric Golgi complex subunit 3 isoform X1. (828 aa)
TGOLN2Trans-Golgi network integral membrane protein 2 isoform X1. (176 aa)
VPS52Vacuolar protein sorting-associated protein 52 homolog isoform X1. (705 aa)
COG8Conserved oligomeric Golgi complex subunit 8. (536 aa)
COG5Conserved oligomeric Golgi complex subunit 5. (861 aa)
TMF1TATA element modulatory factor. (1090 aa)
COG2Conserved oligomeric Golgi complex subunit 2 isoform X1. (738 aa)
RAB36Ras-related protein Rab-36 isoform X1. (296 aa)
EIPR1EARP and GARP complex-interacting protein 1. (387 aa)
RGP1RGP1 homolog, RAB6A GEF complex partner 1. (391 aa)
VPS53Vacuolar protein sorting-associated protein 53 homolog. (832 aa)
COG7Conserved oligomeric Golgi complex subunit 7 isoform X1. (770 aa)
VPS50Syndetin isoform X1. (963 aa)
COG6Conserved oligomeric Golgi complex subunit 6 isoform X1. (657 aa)
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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