STRINGSTRING
SEC22B SEC22B YIPF7 YIPF7 ENSPPRP00000027720 ENSPPRP00000027720 ENSPPRP00000023168 ENSPPRP00000023168 VTI1A VTI1A YIPF4 YIPF4 YIPF5 YIPF5 USO1 USO1 BET1 BET1 VTI1B VTI1B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SEC22BVesicle-trafficking protein SEC22b. (215 aa)
YIPF7Protein YIPF5/7. (255 aa)
ENSPPRP00000027720annotation not available (98 aa)
ENSPPRP00000023168annotation not available (191 aa)
VTI1AVesicle transport through interaction with t-SNAREs homolog 1A isoform X1. (217 aa)
YIPF4Protein YIPF4. (244 aa)
YIPF5Protein YIPF5/7. (257 aa)
USO1General vesicular transport factor p115 isoform X1. (974 aa)
BET1Blocked early in transport 1. (118 aa)
VTI1BVesicle transport through interaction with t-SNAREs homolog 1B isoform X1. (232 aa)
Your Current Organism:
Panthera pardus
NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard
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