(31 nodes) SNARE interactions in vesicular transport network (Panthera pardus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	YKT6	Synaptobrevin homolog YKT6 isoform X1. (198 aa)
	STX7	Syntaxin-7 isoform X1. (261 aa)
	VAMP1	Vesicle-associated membrane protein 1 isoform X1. (118 aa)
	STX16-NPEPL1	Syntaxin-16 isoform X1. (326 aa)
	STX1A	Syntaxin-1A isoform X1. (288 aa)
	STX2	Syntaxin-2 isoform X1. (278 aa)
	STX5	Syntaxin-5 isoform X1. (355 aa)
	VAMP3	Vesicle-associated membrane protein 3. (104 aa)
	GOSR1	Golgi SNAP receptor complex member 1 isoform X1. (250 aa)
	VAMP7	Vesicle-associated membrane protein 7 isoform X1. (220 aa)
	GOSR2	Golgi SNAP receptor complex member 2 isoform X1. (212 aa)
	VTI1B	Vesicle transport through interaction with t-SNAREs homolog 1B isoform X1. (232 aa)
	USE1	Unconventional SNARE in the endoplasmic reticulum protein 1. (260 aa)
	SEC22B	Vesicle-trafficking protein SEC22b. (215 aa)
	VAMP5	Vesicle-associated membrane protein 5 isoform X1. (116 aa)
	VAMP8	Vesicle-associated membrane protein 8 isoform X1. (101 aa)
	VAMP4	Vesicle-associated membrane protein 4. (141 aa)
	BET1	Blocked early in transport 1. (118 aa)
	STX8	Syntaxin-8 isoform X1. (236 aa)
	STX4	Syntaxin-4 isoform X1. (295 aa)
	STX1B	Syntaxin-1B isoform X1. (278 aa)
	STX19	Syntaxin 11. (294 aa)
	STX3	Syntaxin-3 isoform X1. (302 aa)
	STX17	Syntaxin 17. (302 aa)
	SNAP29	Synaptosomal-associated protein 29. (258 aa)
	BET1L	BET1-like protein isoform X1. (111 aa)
	VAMP2	Vesicle-associated membrane protein 2. (118 aa)
	SNAP23	Synaptosomal-associated protein 23 isoform X1. (211 aa)
	STX6	Syntaxin-6 isoform X1. (255 aa)
	VTI1A	Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1. (217 aa)
	STX11	Syntaxin 11. (287 aa)

Your Current Organism:

Panthera pardus

NCBI taxonomy Id: 9691
Other names: Leo pardus, P. pardus, leopard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BET1	BET1L	ENSPPRP00000015381	ENSPPRP00000026237	Blocked early in transport 1.	BET1-like protein isoform X1.	0.934
BET1	GOSR1	ENSPPRP00000015381	ENSPPRP00000009712	Blocked early in transport 1.	Golgi SNAP receptor complex member 1 isoform X1.	0.981
BET1	GOSR2	ENSPPRP00000015381	ENSPPRP00000011336	Blocked early in transport 1.	Golgi SNAP receptor complex member 2 isoform X1.	0.998
BET1	SEC22B	ENSPPRP00000015381	ENSPPRP00000013867	Blocked early in transport 1.	Vesicle-trafficking protein SEC22b.	0.992
BET1	SNAP29	ENSPPRP00000015381	ENSPPRP00000025567	Blocked early in transport 1.	Synaptosomal-associated protein 29.	0.563
BET1	STX16-NPEPL1	ENSPPRP00000015381	ENSPPRP00000004459	Blocked early in transport 1.	Syntaxin-16 isoform X1.	0.634
BET1	STX17	ENSPPRP00000015381	ENSPPRP00000025088	Blocked early in transport 1.	Syntaxin 17.	0.750
BET1	STX5	ENSPPRP00000015381	ENSPPRP00000008119	Blocked early in transport 1.	Syntaxin-5 isoform X1.	0.998
BET1	STX7	ENSPPRP00000015381	ENSPPRP00000003545	Blocked early in transport 1.	Syntaxin-7 isoform X1.	0.636
BET1	USE1	ENSPPRP00000015381	ENSPPRP00000011425	Blocked early in transport 1.	Unconventional SNARE in the endoplasmic reticulum protein 1.	0.524
BET1	VAMP1	ENSPPRP00000015381	ENSPPRP00000003961	Blocked early in transport 1.	Vesicle-associated membrane protein 1 isoform X1.	0.452
BET1	VAMP2	ENSPPRP00000015381	ENSPPRP00000026888	Blocked early in transport 1.	Vesicle-associated membrane protein 2.	0.452
BET1	VAMP3	ENSPPRP00000015381	ENSPPRP00000008691	Blocked early in transport 1.	Vesicle-associated membrane protein 3.	0.452
BET1	VAMP4	ENSPPRP00000015381	ENSPPRP00000014609	Blocked early in transport 1.	Vesicle-associated membrane protein 4.	0.660
BET1	VAMP5	ENSPPRP00000015381	ENSPPRP00000014054	Blocked early in transport 1.	Vesicle-associated membrane protein 5 isoform X1.	0.407
BET1	VAMP7	ENSPPRP00000015381	ENSPPRP00000011004	Blocked early in transport 1.	Vesicle-associated membrane protein 7 isoform X1.	0.519
BET1	VAMP8	ENSPPRP00000015381	ENSPPRP00000014063	Blocked early in transport 1.	Vesicle-associated membrane protein 8 isoform X1.	0.873
BET1	VTI1A	ENSPPRP00000015381	ENSPPRP00000028279	Blocked early in transport 1.	Vesicle transport through interaction with t-SNAREs homolog 1A isoform X1.	0.645
BET1	YKT6	ENSPPRP00000015381	ENSPPRP00000003532	Blocked early in transport 1.	Synaptobrevin homolog YKT6 isoform X1.	0.976
BET1L	BET1	ENSPPRP00000026237	ENSPPRP00000015381	BET1-like protein isoform X1.	Blocked early in transport 1.	0.934