(5 nodes) Mixed, incl. Ribosomal protein L10P, and Ribosomal protein L4/L1e network (Odobenus rosmarus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RPL36	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family. (105 aa)
	LOC101379001	60S ribosomal protein L4 isoform X1. (420 aa)
	RPLP0	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (317 aa)
	RPL17	60S ribosomal protein L17 isoform X1; Belongs to the universal ribosomal protein uL22 family. (184 aa)
	RPL14	60S ribosomal protein L14. (210 aa)

Your Current Organism:

Odobenus rosmarus

NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC101379001	RPL14	A0A2U3VLD9	A0A2U3WSG3	60S ribosomal protein L4 isoform X1.	60S ribosomal protein L14.	0.999
LOC101379001	RPL17	A0A2U3VLD9	A0A2U3WN92	60S ribosomal protein L4 isoform X1.	60S ribosomal protein L17 isoform X1; Belongs to the universal ribosomal protein uL22 family.	0.999
LOC101379001	RPL36	A0A2U3VLD9	A0A2U3VKB6	60S ribosomal protein L4 isoform X1.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.999
LOC101379001	RPLP0	A0A2U3VLD9	A0A2U3VNZ7	60S ribosomal protein L4 isoform X1.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.999
RPL14	LOC101379001	A0A2U3WSG3	A0A2U3VLD9	60S ribosomal protein L14.	60S ribosomal protein L4 isoform X1.	0.999
RPL14	RPL17	A0A2U3WSG3	A0A2U3WN92	60S ribosomal protein L14.	60S ribosomal protein L17 isoform X1; Belongs to the universal ribosomal protein uL22 family.	0.999
RPL14	RPL36	A0A2U3WSG3	A0A2U3VKB6	60S ribosomal protein L14.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.999
RPL14	RPLP0	A0A2U3WSG3	A0A2U3VNZ7	60S ribosomal protein L14.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.999
RPL17	LOC101379001	A0A2U3WN92	A0A2U3VLD9	60S ribosomal protein L17 isoform X1; Belongs to the universal ribosomal protein uL22 family.	60S ribosomal protein L4 isoform X1.	0.999
RPL17	RPL14	A0A2U3WN92	A0A2U3WSG3	60S ribosomal protein L17 isoform X1; Belongs to the universal ribosomal protein uL22 family.	60S ribosomal protein L14.	0.999
RPL17	RPL36	A0A2U3WN92	A0A2U3VKB6	60S ribosomal protein L17 isoform X1; Belongs to the universal ribosomal protein uL22 family.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.999
RPL17	RPLP0	A0A2U3WN92	A0A2U3VNZ7	60S ribosomal protein L17 isoform X1; Belongs to the universal ribosomal protein uL22 family.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.999
RPL36	LOC101379001	A0A2U3VKB6	A0A2U3VLD9	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	60S ribosomal protein L4 isoform X1.	0.999
RPL36	RPL14	A0A2U3VKB6	A0A2U3WSG3	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	60S ribosomal protein L14.	0.999
RPL36	RPL17	A0A2U3VKB6	A0A2U3WN92	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	60S ribosomal protein L17 isoform X1; Belongs to the universal ribosomal protein uL22 family.	0.999
RPL36	RPLP0	A0A2U3VKB6	A0A2U3VNZ7	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	0.999
RPLP0	LOC101379001	A0A2U3VNZ7	A0A2U3VLD9	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	60S ribosomal protein L4 isoform X1.	0.999
RPLP0	RPL14	A0A2U3VNZ7	A0A2U3WSG3	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	60S ribosomal protein L14.	0.999
RPLP0	RPL17	A0A2U3VNZ7	A0A2U3WN92	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	60S ribosomal protein L17 isoform X1; Belongs to the universal ribosomal protein uL22 family.	0.999
RPLP0	RPL36	A0A2U3VNZ7	A0A2U3VKB6	60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.	60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.	0.999