STRINGSTRING
BUD13 BUD13 BCAS2 BCAS2 DDX20 DDX20 DDX41 DDX41 METTL14 METTL14 LOC101364501 LOC101364501 CWF19L1 CWF19L1 PRMT5 PRMT5 METTL3 METTL3 HNRNPC HNRNPC SRPK2 SRPK2 LOC101362929 LOC101362929 SNIP1 SNIP1 PPIE PPIE SFPQ SFPQ RBM22 RBM22 KIAA0907 KIAA0907 SNRNP25 SNRNP25 RNPS1 RNPS1 LOC101379233 LOC101379233 HNRNPA3 HNRNPA3 CWC22 CWC22 PSIP1 PSIP1 GEMIN4 GEMIN4 SCNM1 SCNM1 EIF4A3 EIF4A3 LSM4 LSM4 SLU7 SLU7 COIL COIL SRSF1 SRSF1 SNRPA1 SNRPA1 HNRNPA1 HNRNPA1 PAXBP1 PAXBP1 NOVA1 NOVA1 U2AF1 U2AF1 CDC40 CDC40 STRAP STRAP WBP11 WBP11 PRPF38B PRPF38B DHX8 DHX8 SRPK1 SRPK1 LOC101378288 LOC101378288 USP49 USP49 LSM8 LSM8 DCPS DCPS AQR AQR DHX16 DHX16 PRPF18 PRPF18 PRR3 PRR3 SRPK3 SRPK3 PTBP2 PTBP2 GEMIN5 GEMIN5 SRSF7 SRSF7 GEMIN6 GEMIN6 PRPF19 PRPF19 PRPF6 PRPF6 GEMIN8 GEMIN8 RBM44 RBM44 DDX17 DDX17 SNRPD1 SNRPD1 MFAP1 MFAP1 LSM6 LSM6 RBM17 RBM17 XAB2 XAB2 HNRNPM HNRNPM CWC15 CWC15 TFIP11 TFIP11 LOC101376578 LOC101376578 DBR1 DBR1 TRA2B TRA2B RNPC3 RNPC3 LOC101372449 LOC101372449 PRPF4B PRPF4B RBM41 RBM41 LSM5 LSM5 PRPF39 PRPF39 SNRNP70 SNRNP70 LSM2 LSM2 USP39 USP39 CELF6 CELF6 LOC101372154 LOC101372154 SNRPN SNRPN LENG8 LENG8 SART3 SART3 SNRPB2 SNRPB2 CDC5L CDC5L TXNL4A TXNL4A LOC101380875 LOC101380875 SFSWAP SFSWAP RBM19 RBM19 SRSF6 SRSF6 LOC101372568 LOC101372568 LOC101384897 LOC101384897 LOC101376975 LOC101376975 LUC7L3 LUC7L3 PQBP1 PQBP1 LOC101383928 LOC101383928 LOC101384882 LOC101384882 CELF2 CELF2 MTHFSD MTHFSD GCFC2 GCFC2 CCDC130 CCDC130 RBMX2 RBMX2 PRPF38A PRPF38A SNRPD3 SNRPD3 PUF60 PUF60 CWF19L2 CWF19L2 FAM193B FAM193B LOC101379623 LOC101379623 SETX SETX SF3A3 SF3A3 LUC7L LUC7L SRRM2 SRRM2 LOC105757516 LOC105757516 PRPF8 PRPF8 PRPF3 PRPF3 CELF3 CELF3 DDX46 DDX46 DDX5 DDX5 U2AF2 U2AF2 SNRPE SNRPE WBP4 WBP4 LOC101380518 LOC101380518 RSRC1 RSRC1 EFTUD2 EFTUD2 SNRPC SNRPC SRSF3 SRSF3 PRMT7 PRMT7 DHX38 DHX38 PRPF31 PRPF31 HTATSF1 HTATSF1 LOC105758022 LOC105758022 CRNKL1 CRNKL1 LOC101378803 LOC101378803 DDX39B DDX39B SF1 SF1 SF3B2 SF3B2 LOC101363381 LOC101363381 ZRSR2 ZRSR2 RBM4B RBM4B LOC101386064 LOC101386064 LOC101377293 LOC101377293 LOC101378830 LOC101378830 CELF4 CELF4 LRRC51 LRRC51 CLNS1A CLNS1A NCBP2 NCBP2 NCBP1 NCBP1 SMU1 SMU1 LOC101374449 LOC101374449 LOC101376864 LOC101376864 YTHDC1 YTHDC1 LOC101380831 LOC101380831 SF3B3 SF3B3 TXNL4B TXNL4B AAR2 AAR2 ESRP2 ESRP2 NOL3 NOL3 LOC101368971 LOC101368971 SF3B1 SF3B1 RBM14 RBM14 SART1 SART1 BUD31 BUD31 PLRG1 PLRG1 SRSF2 SRSF2 LOC101376101 LOC101376101 SRSF4 SRSF4 DNAJC8 DNAJC8 SYF2 SYF2 SRSF10 SRSF10 PRPF40A PRPF40A CASC3 CASC3 SF3B6 SF3B6 CWC25 CWC25 CCDC94 CCDC94 AMH AMH LSM7 LSM7 SF3A2 SF3A2 CACTIN CACTIN LOC101365370 LOC101365370 CELF5 CELF5 WDR25 WDR25 LSM3 LSM3 ISY1 ISY1 SCAF11 SCAF11 SNRNP35 SNRNP35 CDK13 CDK13 ZCRB1 ZCRB1 SNRPA SNRPA LOC101369390 LOC101369390 U2AF1L4 U2AF1L4 SRSF9 SRSF9 RBM10 RBM10 GPKOW GPKOW DHX9 DHX9 PRPF4 PRPF4 LOC101375442 LOC101375442 SF3B5 SF3B5 TRA2A TRA2A NHP2L1 NHP2L1 PHF5A PHF5A SRSF5 SRSF5 ZMAT2 ZMAT2 IK IK HNRNPA0 HNRNPA0 SNRPB SNRPB RBM8A RBM8A LOC101373629 LOC101373629 SNRPG SNRPG WDR83 WDR83 UBL5 UBL5 DDX39A DDX39A SRRM3 SRRM3 RBM6 RBM6 SNW1 SNW1 USP4 USP4 RBM5 RBM5 CELF1 CELF1 GEMIN2 GEMIN2 SNRNP200 SNRNP200 SF3A1 SF3A1 SNRPF SNRPF DNAJC17 DNAJC17 BTBD19 BTBD19 DDX23 DDX23 PRPF40B PRPF40B NOVA2 NOVA2 GEMIN7 GEMIN7 SNRPD2 SNRPD2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
BUD13BUD13 homolog. (490 aa)
BCAS2pre-mRNA-splicing factor SPF27. (225 aa)
DDX20Probable ATP-dependent RNA helicase DDX20. (823 aa)
DDX41Probable ATP-dependent RNA helicase DDX41 isoform X1. (622 aa)
METTL14N6-adenosine-methyltransferase subunit METTL14; Belongs to the MT-A70-like family. (456 aa)
LOC101364501Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (268 aa)
CWF19L1CWF19-like protein 1 isoform X1. (538 aa)
PRMT5Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (637 aa)
METTL3N6-adenosine-methyltransferase 70 kDa subunit; Belongs to the MT-A70-like family. (580 aa)
HNRNPCHeterogeneous nuclear ribonucleoproteins C1/C2 isoform X1. (307 aa)
SRPK2SRSF protein kinase 2 isoform X2. (686 aa)
LOC101362929UPF0469 protein KIAA0907-like. (512 aa)
SNIP1Smad nuclear-interacting protein 1. (397 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
SFPQSplicing factor, proline- and glutamine-rich. (700 aa)
RBM22pre-mRNA-splicing factor RBM22. (419 aa)
KIAA0907UPF0469 protein KIAA0907 homolog. (616 aa)
SNRNP25U11/U12 small nuclear ribonucleoprotein 25 kDa protein. (123 aa)
RNPS1RNA-binding protein with serine-rich domain 1 isoform X1. (305 aa)
LOC101379233Survival motor neuron protein isoform X1. (289 aa)
HNRNPA3Heterogeneous nuclear ribonucleoprotein A3. (378 aa)
CWC22pre-mRNA-splicing factor CWC22 homolog isoform X1. (908 aa)
PSIP1PC4 and SFRS1-interacting protein isoform X1. (530 aa)
GEMIN4Gem-associated protein 4. (1057 aa)
SCNM1Sodium channel modifier 1. (230 aa)
EIF4A3Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (411 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
SLU7pre-mRNA-splicing factor SLU7. (633 aa)
COILCoilin. (578 aa)
SRSF1Serine/arginine-rich splicing factor 1. (248 aa)
SNRPA1U2 small nuclear ribonucleoprotein A. (255 aa)
HNRNPA1Heterogeneous nuclear ribonucleoprotein A1 isoform X1. (373 aa)
PAXBP1PAX3- and PAX7-binding protein 1. (918 aa)
NOVA1RNA-binding protein Nova-1 isoform X1. (507 aa)
U2AF1Splicing factor U2AF 35 kDa subunit isoform X1. (240 aa)
CDC40pre-mRNA-processing factor 17. (579 aa)
STRAPSerine-threonine kinase receptor-associated protein isoform X1. (350 aa)
WBP11WW domain-binding protein 11. (641 aa)
PRPF38Bpre-mRNA-splicing factor 38B. (549 aa)
DHX8ATP-dependent RNA helicase DHX8. (1220 aa)
SRPK1LOW QUALITY PROTEIN: SRSF protein kinase 1. (831 aa)
LOC101378288Dentin sialophosphoprotein-like. (1380 aa)
USP49Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (682 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
DCPSm7GpppX diphosphatase. (337 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1491 aa)
DHX16Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (1043 aa)
PRPF18pre-mRNA-splicing factor 18. (342 aa)
PRR3Proline-rich protein 3 isoform X1. (249 aa)
SRPK3SRSF protein kinase 3 isoform X1. (564 aa)
PTBP2Polypyrimidine tract-binding protein 2 isoform X1. (540 aa)
GEMIN5Gem-associated protein 5 isoform X1. (1508 aa)
SRSF7Serine/arginine-rich splicing factor 7 isoform X1. (238 aa)
GEMIN6Gem-associated protein 6. (166 aa)
PRPF19pre-mRNA-processing factor 19. (504 aa)
PRPF6pre-mRNA-processing factor 6 isoform X1. (941 aa)
GEMIN8Gem-associated protein 8. (235 aa)
RBM44RNA-binding protein 44. (1052 aa)
DDX17Probable ATP-dependent RNA helicase DDX17 isoform X1; Belongs to the DEAD box helicase family. (652 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
MFAP1Microfibrillar-associated protein 1. (439 aa)
LSM6U6 snRNA-associated Sm-like protein LSm6. (80 aa)
RBM17Splicing factor 45. (401 aa)
XAB2pre-mRNA-splicing factor SYF1. (855 aa)
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (712 aa)
CWC15Spliceosome-associated protein CWC15 homolog. (231 aa)
TFIP11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] (837 aa)
LOC101376578Small nuclear ribonucleoprotein F-like. (86 aa)
DBR1Lariat debranching enzyme isoform X1. (543 aa)
TRA2BTransformer-2 protein homolog beta isoform X1. (290 aa)
RNPC3RNA-binding protein 40 isoform X1. (518 aa)
LOC101372449Putative RNA-binding protein Luc7-like 2 isoform X1. (392 aa)
PRPF4BSerine/threonine-protein kinase PRP4 homolog. (1041 aa)
RBM41RNA-binding protein 41. (269 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
PRPF39pre-mRNA-processing factor 39 isoform X1. (667 aa)
SNRNP70U1 small nuclear ribonucleoprotein 70 kDa isoform X1. (438 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
USP39U4/U6.U5 tri-snRNP-associated protein 2 isoform X1. (565 aa)
CELF6CUGBP Elav-like family member 6 isoform X1. (481 aa)
LOC101372154Small acidic protein. (182 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (240 aa)
LENG8Leukocyte receptor cluster member 8. (802 aa)
SART3Squamous cell carcinoma antigen recognized by T-cells 3 isoform X3. (981 aa)
SNRPB2U2 small nuclear ribonucleoprotein B'' isoform X1. (225 aa)
CDC5LCell division cycle 5-like protein isoform X1. (802 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
LOC101380875Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
SFSWAPSplicing factor, suppressor of white-apricot homolog. (933 aa)
RBM19Probable RNA-binding protein 19. (340 aa)
SRSF6Serine/arginine-rich splicing factor 6. (344 aa)
LOC101372568RNA-binding protein 41. (228 aa)
LOC101384897Probable RNA-binding protein 19. (598 aa)
LOC101376975pre-mRNA-splicing factor SYF2-like. (265 aa)
LUC7L3Luc7-like protein 3 isoform X1. (489 aa)
PQBP1Polyglutamine-binding protein 1 isoform X1. (265 aa)
LOC101383928LOW QUALITY PROTEIN: splicing factor 1-like. (639 aa)
LOC101384882Protein arginine N-methyltransferase 5; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA); Belongs to the class I-like SAM-binding methyltransferase superfamily. (573 aa)
CELF2CUGBP Elav-like family member 2 isoform X1. (547 aa)
MTHFSDMethenyltetrahydrofolate synthase domain-containing protein. (396 aa)
GCFC2GC-rich sequence DNA-binding factor 2 isoform X1. (783 aa)
CCDC130Coiled-coil domain-containing protein 130 isoform X1. (476 aa)
RBMX2RNA-binding motif protein, X-linked 2. (296 aa)
PRPF38Apre-mRNA-splicing factor 38A isoform X1. (319 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
PUF60poly(U)-binding-splicing factor PUF60 isoform X1. (567 aa)
CWF19L2CWF19-like protein 2. (1062 aa)
FAM193BProtein FAM193B. (785 aa)
LOC101379623LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked 2-like. (322 aa)
SETXProbable helicase senataxin isoform X1. (2696 aa)
SF3A3Splicing factor 3A subunit 3 isoform X1. (583 aa)
LUC7LPutative RNA-binding protein Luc7-like 1 isoform X1. (377 aa)
SRRM2Serine/arginine repetitive matrix protein 2. (195 aa)
LOC105757516U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein. (469 aa)
PRPF8pre-mRNA-processing-splicing factor 8. (2335 aa)
PRPF3U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1. (683 aa)
CELF3CUGBP Elav-like family member 3 isoform X1. (463 aa)
DDX46Probable ATP-dependent RNA helicase DDX46 isoform X1. (1032 aa)
DDX5Probable ATP-dependent RNA helicase DDX5 isoform X1; Belongs to the DEAD box helicase family. (614 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (475 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (94 aa)
WBP4WW domain-binding protein 4 isoform X1. (392 aa)
LOC101380518Heterogeneous nuclear ribonucleoprotein A1-like. (299 aa)
RSRC1serine/Arginine-related protein 53 isoform X1. (334 aa)
EFTUD2116 kDa U5 small nuclear ribonucleoprotein component isoform X1. (972 aa)
SNRPCU1 small nuclear ribonucleoprotein C isoform X1. (171 aa)
SRSF3Serine/arginine-rich splicing factor 3 isoform X1. (176 aa)
PRMT7Protein arginine N-methyltransferase; Arginine methyltransferase that can both catalyze the formation of omega-N monomethylarginine (MMA) and symmetrical dimethylarginine (sDMA), with a preference for the formation of MMA. Specifically mediates the symmetrical dimethylation of arginine residues in the small nuclear ribonucleoproteins Sm D1 (SNRPD1) and Sm D3 (SNRPD3); such methylation being required for the assembly and biogenesis of snRNP core particles. Specifically mediates the symmetric dimethylation of histone H4 'Arg-3' to form H4R3me2s. Plays a role in gene imprinting by being r [...] (695 aa)
DHX38pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1239 aa)
PRPF31U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1. (499 aa)
HTATSF1HIV Tat-specific factor 1 isoform X1. (767 aa)
LOC105758022Heterogeneous nuclear ribonucleoprotein A3-like isoform X1. (355 aa)
CRNKL1LOW QUALITY PROTEIN: crooked neck-like protein 1. (829 aa)
LOC101378803Heterogeneous nuclear ribonucleoprotein A1-like. (298 aa)
DDX39BSpliceosome RNA helicase DDX39B isoform X1. (442 aa)
SF1Splicing factor 1. (689 aa)
SF3B2Splicing factor 3B subunit 2 isoform X1. (896 aa)
LOC101363381RNA-binding protein 4. (365 aa)
ZRSR2U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2. (513 aa)
RBM4BRNA-binding protein 4B isoform X1. (431 aa)
LOC101386064LOW QUALITY PROTEIN: pre-mRNA-processing factor 40 homolog A-like. (914 aa)
LOC101377293LOW QUALITY PROTEIN: CWF19-like protein 2. (896 aa)
LOC101378830LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein C-like. (294 aa)
CELF4CUGBP Elav-like family member 4 isoform X1. (495 aa)
LRRC51Leucine rich repeat containing 51 isoform X1. (192 aa)
CLNS1AMethylosome subunit pICln. (235 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
NCBP1Nuclear cap-binding protein subunit 1. (790 aa)
SMU1WD40 repeat-containing protein SMU1. (513 aa)
LOC101374449Uncharacterized protein C9orf78 homolog isoform X1. (289 aa)
LOC101376864Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
YTHDC1YTH domain-containing protein 1 isoform X1. (738 aa)
LOC101380831Heterogeneous nuclear ribonucleoprotein A1-like. (199 aa)
SF3B3Splicing factor 3B subunit 3. (1217 aa)
TXNL4BThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
AAR2Protein AAR2 homolog. (384 aa)
ESRP2Epithelial splicing regulatory protein 2 isoform X1. (726 aa)
NOL3Nucleolar protein 3. (206 aa)
LOC101368971Heterogeneous nuclear ribonucleoprotein A1-like. (320 aa)
SF3B1Splicing factor 3B subunit 1 isoform X1. (1304 aa)
RBM14RNA-binding protein 14 isoform X1. (669 aa)
SART1U4/U6.U5 tri-snRNP-associated protein 1 isoform X1. (806 aa)
BUD31Protein BUD31 homolog. (144 aa)
PLRG1Pleiotropic regulator 1 isoform X1. (515 aa)
SRSF2Serine/arginine-rich splicing factor 2. (221 aa)
LOC101376101Heterogeneous nuclear ribonucleoprotein A1-like. (318 aa)
SRSF4Serine/arginine-rich splicing factor 4. (486 aa)
DNAJC8dnaJ homolog subfamily C member 8 isoform X1. (253 aa)
SYF2pre-mRNA-splicing factor SYF2. (246 aa)
SRSF10Serine/arginine-rich splicing factor 10 isoform X1. (262 aa)
PRPF40Apre-mRNA-processing factor 40 homolog A isoform X1. (994 aa)
CASC3Protein CASC3. (703 aa)
SF3B6Splicing factor 3B subunit 6. (125 aa)
CWC25pre-mRNA-splicing factor CWC25 homolog. (425 aa)
CCDC94Coiled-coil domain-containing protein 94. (324 aa)
AMHMuellerian-inhibiting factor. (578 aa)
LSM7U6 snRNA-associated Sm-like protein LSm7. (103 aa)
SF3A2Splicing factor 3A subunit 2. (471 aa)
CACTINCactin. (750 aa)
LOC101365370Hepatoma-derived growth factor-related protein 2. (423 aa)
CELF5CUGBP Elav-like family member 5 isoform X1. (485 aa)
WDR25WD repeat-containing protein 25. (539 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
ISY1pre-mRNA-splicing factor ISY1 homolog. (285 aa)
SCAF11Protein SCAF11. (1456 aa)
SNRNP35U11/U12 small nuclear ribonucleoprotein 35 kDa protein. (246 aa)
CDK13Cyclin-dependent kinase 13 isoform X1. (1514 aa)
ZCRB1Zinc finger CCHC-type and RNA-binding motif-containing protein 1. (217 aa)
SNRPAU1 small nuclear ribonucleoprotein A. (282 aa)
LOC101369390UPF0692 protein C19orf54 homolog. (348 aa)
U2AF1L4Splicing factor U2AF 26 kDa subunit isoform X1. (240 aa)
SRSF9Serine/arginine-rich splicing factor 9. (221 aa)
RBM10RNA-binding protein 10 isoform X1. (1061 aa)
GPKOWG patch domain and KOW motifs-containing protein isoform X1. (481 aa)
DHX9ATP-dependent RNA helicase A isoform X1. (1277 aa)
PRPF4U4/U6 small nuclear ribonucleoprotein Prp4. (521 aa)
LOC101375442Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
TRA2ATransformer-2 protein homolog alpha isoform X1. (281 aa)
NHP2L1Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (163 aa)
PHF5APHD finger-like domain-containing protein 5A. (110 aa)
SRSF5Serine/arginine-rich splicing factor 5 isoform X1. (272 aa)
ZMAT2Zinc finger matrin-type protein 2. (199 aa)
IKProtein Red. (563 aa)
HNRNPA0Heterogeneous nuclear ribonucleoprotein A0. (308 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
LOC101373629Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (123 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
WDR83WD repeat domain-containing protein 83. (315 aa)
UBL5Ubiquitin-like protein 5. (73 aa)
DDX39AATP-dependent RNA helicase DDX39A. (427 aa)
SRRM3Serine/arginine repetitive matrix protein 3. (593 aa)
RBM6RNA-binding protein 6 isoform X1. (1122 aa)
SNW1SNW domain-containing protein 1 isoform X1. (536 aa)
USP4Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (964 aa)
RBM5RNA-binding protein 5 isoform X1. (841 aa)
CELF1CUGBP Elav-like family member 1 isoform X1. (512 aa)
GEMIN2Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (279 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2136 aa)
SF3A1Splicing factor 3A subunit 1. (793 aa)
SNRPFSmall nuclear ribonucleoprotein F. (86 aa)
DNAJC17dnaJ homolog subfamily C member 17. (304 aa)
BTBD19BTB/POZ domain-containing protein 19. (291 aa)
DDX23Probable ATP-dependent RNA helicase DDX23. (820 aa)
PRPF40Bpre-mRNA-processing factor 40 homolog B isoform X1. (871 aa)
NOVA2RNA-binding protein Nova-2. (492 aa)
GEMIN7Gem-associated protein 7. (131 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (22%) [HD]