16 items (Odobenus rosmarus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LIPG	Endothelial lipase. (503 aa)
	LOC101373637	Phospholipase DDHD2-like. (135 aa)
	LOC101370674	LOW QUALITY PROTEIN: phospholipase DDHD2-like. (551 aa)
	LIPC	Hepatic triacylglycerol lipase. (500 aa)
	PNPLA4	Patatin-like phospholipase domain-containing protein 4. (263 aa)
	PNPLA5	Patatin-like phospholipase domain-containing protein 5. (427 aa)
	MGLL	Monoglyceride lipase isoform X1. (346 aa)
	CPS1	Carbamoyl-phosphate synthase [ammonia], mitochondrial. (1500 aa)
	LOC105758333	Patatin-like phospholipase domain-containing protein 3. (185 aa)
	LPL	Lipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans. (479 aa)
	APOB	Apolipoprotein B-100. (4435 aa)
	PNPLA2	Patatin-like phospholipase domain-containing protein 2. (486 aa)
	PNPLA3	Patatin-like phospholipase domain-containing protein 3. (257 aa)
	LIPH	Lipase member H. (451 aa)
	LIPE	Hormone-sensitive lipase. (762 aa)
	PNPLA1	Patatin-like phospholipase domain-containing protein 1. (565 aa)

Your Current Organism:

Odobenus rosmarus

NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
APOB	LIPC	A0A2U3WB12	A0A2U3ZNC0	Apolipoprotein B-100.	Hepatic triacylglycerol lipase.	0.938
APOB	LIPG	A0A2U3WB12	A0A2U3WN90	Apolipoprotein B-100.	Endothelial lipase.	0.424
APOB	LPL	A0A2U3WB12	A0A2U3ZVG7	Apolipoprotein B-100.	Lipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans.	0.635
LIPC	APOB	A0A2U3ZNC0	A0A2U3WB12	Hepatic triacylglycerol lipase.	Apolipoprotein B-100.	0.938
LIPC	LIPE	A0A2U3ZNC0	A0A2U3WHM0	Hepatic triacylglycerol lipase.	Hormone-sensitive lipase.	0.406
LIPC	LIPG	A0A2U3ZNC0	A0A2U3WN90	Hepatic triacylglycerol lipase.	Endothelial lipase.	0.901
LIPC	LPL	A0A2U3ZNC0	A0A2U3ZVG7	Hepatic triacylglycerol lipase.	Lipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans.	0.926
LIPC	MGLL	A0A2U3ZNC0	A0A2U3VLB4	Hepatic triacylglycerol lipase.	Monoglyceride lipase isoform X1.	0.911
LIPC	PNPLA2	A0A2U3ZNC0	A0A2U3W6N1	Hepatic triacylglycerol lipase.	Patatin-like phospholipase domain-containing protein 2.	0.909
LIPC	PNPLA3	A0A2U3ZNC0	A0A2U3VQP1	Hepatic triacylglycerol lipase.	Patatin-like phospholipase domain-containing protein 3.	0.921
LIPE	LIPC	A0A2U3WHM0	A0A2U3ZNC0	Hormone-sensitive lipase.	Hepatic triacylglycerol lipase.	0.406
LIPE	LPL	A0A2U3WHM0	A0A2U3ZVG7	Hormone-sensitive lipase.	Lipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans.	0.621
LIPE	MGLL	A0A2U3WHM0	A0A2U3VLB4	Hormone-sensitive lipase.	Monoglyceride lipase isoform X1.	0.632
LIPE	PNPLA2	A0A2U3WHM0	A0A2U3W6N1	Hormone-sensitive lipase.	Patatin-like phospholipase domain-containing protein 2.	0.771
LIPE	PNPLA4	A0A2U3WHM0	A0A2U3W052	Hormone-sensitive lipase.	Patatin-like phospholipase domain-containing protein 4.	0.403
LIPG	APOB	A0A2U3WN90	A0A2U3WB12	Endothelial lipase.	Apolipoprotein B-100.	0.424
LIPG	LIPC	A0A2U3WN90	A0A2U3ZNC0	Endothelial lipase.	Hepatic triacylglycerol lipase.	0.901
LIPG	LPL	A0A2U3WN90	A0A2U3ZVG7	Endothelial lipase.	Lipoprotein lipase; Key enzyme in triglyceride metabolism. Catalyzes the hydrolysis of triglycerides from circulating chylomicrons and very low density lipoproteins (VLDL), and thereby plays an important role in lipid clearance from the blood stream, lipid utilization and storage. Mediates margination of triglyceride-rich lipoprotein particles in capillaries. Recruited to its site of action on the luminal surface of vascular endothelium by binding to GPIHBP1 and cell surface heparan sulfate proteoglycans.	0.902
LIPG	MGLL	A0A2U3WN90	A0A2U3VLB4	Endothelial lipase.	Monoglyceride lipase isoform X1.	0.916
LIPG	PNPLA2	A0A2U3WN90	A0A2U3W6N1	Endothelial lipase.	Patatin-like phospholipase domain-containing protein 2.	0.903