25 items (Odobenus rosmarus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DAB1	Disabled homolog 1. (486 aa)
	DAB2IP	LOW QUALITY PROTEIN: disabled homolog 2-interacting protein. (1338 aa)
	FBXO41	F-box only protein 41. (874 aa)
	LOC101378833	Insulin receptor substrate 2-like. (528 aa)
	HCST	Hematopoietic cell signal transducer. (79 aa)
	PTPN13	Tyrosine-protein phosphatase non-receptor type 13. (2511 aa)
	IRS4	LOW QUALITY PROTEIN: insulin receptor substrate 4. (1307 aa)
	FBXL20	F-box/LRR-repeat protein 20 isoform X1. (438 aa)
	PIK3IP1	Phosphoinositide-3-kinase-interacting protein 1 isoform X1. (268 aa)
	TYRO3	Tyrosine-protein kinase receptor TYRO3. (894 aa)
	INSRR	Tyrosine-protein kinase receptor. (1300 aa)
	PIK3R2	Phosphatidylinositol 3-kinase regulatory subunit beta. (726 aa)
	DCAF8	DDB1- and CUL4-associated factor 8. (596 aa)
	FBXL2	F-box/LRR-repeat protein 2 isoform X1. (423 aa)
	PIK3AP1	Phosphoinositide 3-kinase adapter protein 1. (835 aa)
	IRS2	Insulin receptor substrate 2. (1327 aa)
	IRS1	Insulin receptor substrate 1. (1233 aa)
	BECN1	Beclin-1. (448 aa)
	GSN	Gelsolin isoform X1. (782 aa)
	INSR	Tyrosine-protein kinase receptor. (1381 aa)
	PIK3R1	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1. (725 aa)
	FAM83B	Protein FAM83B. (858 aa)
	CORO1A	Coronin; Belongs to the WD repeat coronin family. (461 aa)
	NLRC3	Protein NLRC3 isoform X1. (1068 aa)
	IGF1R	Tyrosine-protein kinase receptor. (1304 aa)

Your Current Organism:

Odobenus rosmarus

NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DAB1	DAB2IP	A0A2U3ZW83	A0A2U3ZRY8	Disabled homolog 1.	LOW QUALITY PROTEIN: disabled homolog 2-interacting protein.	0.402
DAB1	PIK3R1	A0A2U3ZW83	A0A2U3X1Z3	Disabled homolog 1.	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1.	0.925
DAB1	PIK3R2	A0A2U3ZW83	A0A2U3W8T2	Disabled homolog 1.	Phosphatidylinositol 3-kinase regulatory subunit beta.	0.913
DAB2IP	DAB1	A0A2U3ZRY8	A0A2U3ZW83	LOW QUALITY PROTEIN: disabled homolog 2-interacting protein.	Disabled homolog 1.	0.402
HCST	PIK3R1	A0A2U3VN76	A0A2U3X1Z3	Hematopoietic cell signal transducer.	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1.	0.923
HCST	PIK3R2	A0A2U3VN76	A0A2U3W8T2	Hematopoietic cell signal transducer.	Phosphatidylinositol 3-kinase regulatory subunit beta.	0.910
IGF1R	INSR	A0A2U3ZLZ8	A0A2U3WSM4	Tyrosine-protein kinase receptor.	Tyrosine-protein kinase receptor.	0.986
IGF1R	INSRR	A0A2U3ZLZ8	A0A2U3W4C1	Tyrosine-protein kinase receptor.	Tyrosine-protein kinase receptor.	0.635
IGF1R	IRS1	A0A2U3ZLZ8	A0A2U3WLJ5	Tyrosine-protein kinase receptor.	Insulin receptor substrate 1.	0.980
IGF1R	IRS2	A0A2U3ZLZ8	A0A2U3WL54	Tyrosine-protein kinase receptor.	Insulin receptor substrate 2.	0.980
IGF1R	IRS4	A0A2U3ZLZ8	A0A2U3VWM9	Tyrosine-protein kinase receptor.	LOW QUALITY PROTEIN: insulin receptor substrate 4.	0.980
IGF1R	LOC101378833	A0A2U3ZLZ8	A0A2U3VUV5	Tyrosine-protein kinase receptor.	Insulin receptor substrate 2-like.	0.980
IGF1R	PIK3R1	A0A2U3ZLZ8	A0A2U3X1Z3	Tyrosine-protein kinase receptor.	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1.	0.971
IGF1R	PIK3R2	A0A2U3ZLZ8	A0A2U3W8T2	Tyrosine-protein kinase receptor.	Phosphatidylinositol 3-kinase regulatory subunit beta.	0.949
IGF1R	PTPN13	A0A2U3ZLZ8	A0A2U3VAW0	Tyrosine-protein kinase receptor.	Tyrosine-protein phosphatase non-receptor type 13.	0.409
INSR	IGF1R	A0A2U3WSM4	A0A2U3ZLZ8	Tyrosine-protein kinase receptor.	Tyrosine-protein kinase receptor.	0.986
INSR	INSRR	A0A2U3WSM4	A0A2U3W4C1	Tyrosine-protein kinase receptor.	Tyrosine-protein kinase receptor.	0.800
INSR	IRS1	A0A2U3WSM4	A0A2U3WLJ5	Tyrosine-protein kinase receptor.	Insulin receptor substrate 1.	0.980
INSR	IRS2	A0A2U3WSM4	A0A2U3WL54	Tyrosine-protein kinase receptor.	Insulin receptor substrate 2.	0.979
INSR	IRS4	A0A2U3WSM4	A0A2U3VWM9	Tyrosine-protein kinase receptor.	LOW QUALITY PROTEIN: insulin receptor substrate 4.	0.968