STRINGSTRING
WBP4 WBP4 SRRM2 SRRM2 LOC101379623 LOC101379623 PRPF38A PRPF38A RBMX2 RBMX2 TXNL4A TXNL4A MFAP1 MFAP1 DHX16 DHX16 RNF113A RNF113A SNIP1 SNIP1 LOC101375942 LOC101375942 CWC27 CWC27 SNRPD2 SNRPD2 SF3A1 SF3A1 SNRNP200 SNRNP200 SRRM3 SRRM3 SNRPB SNRPB IK IK ZMAT2 ZMAT2 SF3B5 SF3B5 SF3A2 SF3A2 SMU1 SMU1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WBP4WW domain-binding protein 4 isoform X1. (392 aa)
SRRM2Serine/arginine repetitive matrix protein 2. (195 aa)
LOC101379623LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked 2-like. (322 aa)
PRPF38Apre-mRNA-splicing factor 38A isoform X1. (319 aa)
RBMX2RNA-binding motif protein, X-linked 2. (296 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
MFAP1Microfibrillar-associated protein 1. (439 aa)
DHX16Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (1043 aa)
RNF113ARING finger protein 113A. (344 aa)
SNIP1Smad nuclear-interacting protein 1. (397 aa)
LOC101375942RING finger protein 113A-like. (344 aa)
CWC27Peptidyl-prolyl cis-trans isomerase CWC27 homolog isoform X1. (472 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
SF3A1Splicing factor 3A subunit 1. (793 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2136 aa)
SRRM3Serine/arginine repetitive matrix protein 3. (593 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
IKProtein Red. (563 aa)
ZMAT2Zinc finger matrin-type protein 2. (199 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
SF3A2Splicing factor 3A subunit 2. (471 aa)
SMU1WD40 repeat-containing protein SMU1. (513 aa)
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.