23 items (Odobenus rosmarus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FCRL4	Fc receptor-like protein 4. (525 aa)
	FCRL5	Fc receptor-like protein 5. (770 aa)
	FCRL3	Fc receptor-like protein 3. (754 aa)
	LOC105758400	LOW QUALITY PROTEIN: high affinity immunoglobulin epsilon receptor subunit beta-like. (293 aa)
	LOC101380000	LOW QUALITY PROTEIN: uncharacterized protein LOC101380000. (353 aa)
	GAB2	GRB2-associated-binding protein 2. (677 aa)
	GRB2	Growth factor receptor-bound protein 2 isoform X1. (217 aa)
	PIK3CA	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit. (1068 aa)
	LAT2	Linker for activation of T-cells family member 2. (218 aa)
	PDPK1	3-phosphoinositide-dependent protein kinase 1 isoform X1. (558 aa)
	PIK3R2	Phosphatidylinositol 3-kinase regulatory subunit beta. (726 aa)
	FCER1A	High affinity immunoglobulin epsilon receptor subunit alpha. (260 aa)
	FCER1G	High affinity immunoglobulin epsilon receptor subunit gamma. (86 aa)
	SYK	Tyrosine-protein kinase. (635 aa)
	SOS1	Son of sevenless homolog 1 isoform X1. (1333 aa)
	PIK3CB	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform isoform X1; Belongs to the PI3/PI4-kinase family. (1070 aa)
	LYN	Tyrosine-protein kinase. (512 aa)
	FCRL1	Fc receptor-like protein 1. (431 aa)
	PIK3R1	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1. (725 aa)
	MS4A2	High affinity immunoglobulin epsilon receptor subunit beta. (243 aa)
	LOC101367061	LOW QUALITY PROTEIN: uncharacterized protein LOC101367061. (492 aa)
	LOC101382618	Ig lambda chain V-I region BL2. (234 aa)
	SHC1	SHC-transforming protein 1 isoform X1. (609 aa)

Your Current Organism:

Odobenus rosmarus

NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FCER1A	FCER1G	A0A2U3WGR5	A0A2U3WGX6	High affinity immunoglobulin epsilon receptor subunit alpha.	High affinity immunoglobulin epsilon receptor subunit gamma.	0.965
FCER1A	LOC105758400	A0A2U3WGR5	A0A2U3ZXS3	High affinity immunoglobulin epsilon receptor subunit alpha.	LOW QUALITY PROTEIN: high affinity immunoglobulin epsilon receptor subunit beta-like.	0.991
FCER1A	LYN	A0A2U3WGR5	A0A2U3WXZ8	High affinity immunoglobulin epsilon receptor subunit alpha.	Tyrosine-protein kinase.	0.632
FCER1A	MS4A2	A0A2U3WGR5	A0A2U3X476	High affinity immunoglobulin epsilon receptor subunit alpha.	High affinity immunoglobulin epsilon receptor subunit beta.	0.991
FCER1A	SYK	A0A2U3WGR5	A0A2U3WLR1	High affinity immunoglobulin epsilon receptor subunit alpha.	Tyrosine-protein kinase.	0.925
FCER1G	FCER1A	A0A2U3WGX6	A0A2U3WGR5	High affinity immunoglobulin epsilon receptor subunit gamma.	High affinity immunoglobulin epsilon receptor subunit alpha.	0.965
FCER1G	LOC105758400	A0A2U3WGX6	A0A2U3ZXS3	High affinity immunoglobulin epsilon receptor subunit gamma.	LOW QUALITY PROTEIN: high affinity immunoglobulin epsilon receptor subunit beta-like.	0.967
FCER1G	LYN	A0A2U3WGX6	A0A2U3WXZ8	High affinity immunoglobulin epsilon receptor subunit gamma.	Tyrosine-protein kinase.	0.965
FCER1G	MS4A2	A0A2U3WGX6	A0A2U3X476	High affinity immunoglobulin epsilon receptor subunit gamma.	High affinity immunoglobulin epsilon receptor subunit beta.	0.967
FCER1G	PIK3CA	A0A2U3WGX6	A0A2U3VSW6	High affinity immunoglobulin epsilon receptor subunit gamma.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.	0.930
FCER1G	PIK3CB	A0A2U3WGX6	A0A2U3WV15	High affinity immunoglobulin epsilon receptor subunit gamma.	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform isoform X1; Belongs to the PI3/PI4-kinase family.	0.944
FCER1G	PIK3R1	A0A2U3WGX6	A0A2U3X1Z3	High affinity immunoglobulin epsilon receptor subunit gamma.	Phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1.	0.939
FCER1G	PIK3R2	A0A2U3WGX6	A0A2U3W8T2	High affinity immunoglobulin epsilon receptor subunit gamma.	Phosphatidylinositol 3-kinase regulatory subunit beta.	0.939
FCER1G	SYK	A0A2U3WGX6	A0A2U3WLR1	High affinity immunoglobulin epsilon receptor subunit gamma.	Tyrosine-protein kinase.	0.997
FCRL1	LOC105758400	A0A2U3X1R6	A0A2U3ZXS3	Fc receptor-like protein 1.	LOW QUALITY PROTEIN: high affinity immunoglobulin epsilon receptor subunit beta-like.	0.554
FCRL1	LYN	A0A2U3X1R6	A0A2U3WXZ8	Fc receptor-like protein 1.	Tyrosine-protein kinase.	0.404
FCRL1	MS4A2	A0A2U3X1R6	A0A2U3X476	Fc receptor-like protein 1.	High affinity immunoglobulin epsilon receptor subunit beta.	0.554
FCRL3	LOC105758400	A0A2U3ZXP0	A0A2U3ZXS3	Fc receptor-like protein 3.	LOW QUALITY PROTEIN: high affinity immunoglobulin epsilon receptor subunit beta-like.	0.554
FCRL3	LYN	A0A2U3ZXP0	A0A2U3WXZ8	Fc receptor-like protein 3.	Tyrosine-protein kinase.	0.404
FCRL3	MS4A2	A0A2U3ZXP0	A0A2U3X476	Fc receptor-like protein 3.	High affinity immunoglobulin epsilon receptor subunit beta.	0.554