62 items (Odobenus rosmarus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	RNF169	E3 ubiquitin-protein ligase RNF169. (708 aa)
	PHC3	Polyhomeotic-like protein 3 isoform X1. (995 aa)
	SUMO1	Small ubiquitin-related modifier. (101 aa)
	PARP1	Poly [ADP-ribose] polymerase; Poly-ADP-ribosyltransferase that mediates poly-ADP- ribosylation of proteins and plays a key role in DNA repair. (1014 aa)
	SUMO2	Small ubiquitin-related modifier. (95 aa)
	KCTD2	BTB/POZ domain-containing protein KCTD2. (263 aa)
	PCGF2	Polycomb group RING finger protein 2. (344 aa)
	PIAS4	E3 SUMO-protein ligase PIAS4. (509 aa)
	NSMCE1	Non-structural maintenance of chromosomes element 1 homolog isoform X1. (283 aa)
	NFATC2IP	NFATC2-interacting protein. (549 aa)
	SMC5	Structural maintenance of chromosomes protein 5. (1107 aa)
	LOC101374670	Centrin-2. (172 aa)
	LOC101374392	Uncharacterized protein C20orf196 homolog. (206 aa)
	BLM	Bloom syndrome protein isoform X1. (1428 aa)
	RECQL4	ATP-dependent DNA helicase Q4. (1183 aa)
	SCML2	Sex comb on midleg-like protein 2 isoform X1. (698 aa)
	LOC101370219	Small ubiquitin-related modifier. (95 aa)
	UBE2I	SUMO-conjugating enzyme UBC9 isoform X1; Belongs to the ubiquitin-conjugating enzyme family. (158 aa)
	MEIOB	Meiosis-specific with OB domain-containing protein isoform X2. (471 aa)
	CETN3	Centrin-3. (167 aa)
	NSMCE4A	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (385 aa)
	CBX4	E3 SUMO-protein ligase CBX4. (552 aa)
	CBX2	Chromobox protein homolog 2. (528 aa)
	LOC101363339	Small ubiquitin-related modifier. (101 aa)
	RNF2	E3 ubiquitin-protein ligase RING2 isoform X1. (336 aa)
	LOC101373164	Small ubiquitin-related modifier. (95 aa)
	LOC101383883	Small ubiquitin-related modifier. (101 aa)
	SCMH1	Polycomb protein SCMH1 isoform X1. (690 aa)
	LOC101377981	Small ubiquitin-related modifier. (95 aa)
	LOC101372008	Melanoma-associated antigen F1. (325 aa)
	SMC6	Structural maintenance of chromosomes protein 6. (1097 aa)
	RING1	E3 ubiquitin-protein ligase RING1. (406 aa)
	PML	Protein PML. (928 aa)
	SEH1L	Nucleoporin SEH1 isoform X1; Belongs to the WD repeat SEC13 family. (421 aa)
	MDC1	Mediator of DNA damage checkpoint protein 1. (1959 aa)
	NDNL2	Melanoma-associated antigen G1. (284 aa)
	NSMCE2	E3 SUMO-protein ligase NSE2. (247 aa)
	LOC101368752	Melanoma-associated antigen E2. (523 aa)
	SUMO3	Small ubiquitin-related modifier. (111 aa)
	LOC101363366	Small ubiquitin-related modifier. (95 aa)
	EID3	Non-structural maintenance of chromosomes element 4; Component of the SMC5-SMC6 complex, that promotes sister chromatid alignment after DNA damage and facilitates double-stranded DNA breaks (DSBs) repair via homologous recombination between sister chromatids. (370 aa)
	TDG	G/T mismatch-specific thymine DNA glycosylase. (406 aa)
	LOC101363303	Melanoma-associated antigen B17-like. (344 aa)
	SCML1	Sex comb on midleg-like protein 1. (418 aa)
	LOC101368410	Melanoma-associated antigen B18-like. (338 aa)
	LOC101384496	Melanoma-associated antigen B10. (348 aa)
	LOC101371279	Melanoma-associated antigen B2-like. (344 aa)
	LOC101383066	Nuclear body protein SP140. (740 aa)
	LOC101383358	Nuclear body protein SP140-like protein. (812 aa)
	SP110	Sp110 nuclear body protein. (714 aa)
	RPA1	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
	CBX8	Chromobox protein homolog 8 isoform X1. (395 aa)
	PHC2	Polyhomeotic-like protein 2 isoform X1. (869 aa)
	BMI1	Polycomb complex protein BMI-1 isoform X1. (326 aa)
	LOC101380414	LOW QUALITY PROTEIN: melanoma-associated antigen B1-like. (318 aa)
	PHC1	Polyhomeotic-like protein 1. (982 aa)
	PIAS1	E3 SUMO-protein ligase PIAS1 isoform X1. (655 aa)
	CETN2	Centrin-2. (113 aa)
	LOC101383373	Melanoma-associated antigen B10-like. (347 aa)
	LOC101384780	LOW QUALITY PROTEIN: melanoma-associated antigen B10-like. (348 aa)
	LOC101384041	Melanoma-associated antigen B17. (320 aa)
	LOC101370984	Melanoma-associated antigen B3. (356 aa)

Your Current Organism:

Odobenus rosmarus

NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BLM	KCTD2	A0A2U3VSN6	A0A2U3VHV8	Bloom syndrome protein isoform X1.	BTB/POZ domain-containing protein KCTD2.	0.599
BLM	LOC101363339	A0A2U3VSN6	A0A2U3WA11	Bloom syndrome protein isoform X1.	Small ubiquitin-related modifier.	0.476
BLM	LOC101363366	A0A2U3VSN6	A0A2U3WRD5	Bloom syndrome protein isoform X1.	Small ubiquitin-related modifier.	0.534
BLM	LOC101370219	A0A2U3VSN6	A0A2U3W4A8	Bloom syndrome protein isoform X1.	Small ubiquitin-related modifier.	0.534
BLM	LOC101373164	A0A2U3VSN6	A0A2U3WBN5	Bloom syndrome protein isoform X1.	Small ubiquitin-related modifier.	0.534
BLM	LOC101377981	A0A2U3VSN6	A0A2U3WDV4	Bloom syndrome protein isoform X1.	Small ubiquitin-related modifier.	0.534
BLM	LOC101383883	A0A2U3VSN6	A0A2U3WBX5	Bloom syndrome protein isoform X1.	Small ubiquitin-related modifier.	0.476
BLM	MDC1	A0A2U3VSN6	A0A2U3WJT3	Bloom syndrome protein isoform X1.	Mediator of DNA damage checkpoint protein 1.	0.675
BLM	MEIOB	A0A2U3VSN6	A0A2U3W515	Bloom syndrome protein isoform X1.	Meiosis-specific with OB domain-containing protein isoform X2.	0.763
BLM	NFATC2IP	A0A2U3VSN6	A0A2U3VQ66	Bloom syndrome protein isoform X1.	NFATC2-interacting protein.	0.476
BLM	NSMCE2	A0A2U3VSN6	A0A2U3WMZ0	Bloom syndrome protein isoform X1.	E3 SUMO-protein ligase NSE2.	0.514
BLM	RPA1	A0A2U3VSN6	A0A2U3ZJH2	Bloom syndrome protein isoform X1.	Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage.	0.988
BLM	SMC5	A0A2U3VSN6	A0A2U3VQV3	Bloom syndrome protein isoform X1.	Structural maintenance of chromosomes protein 5.	0.595
BLM	SMC6	A0A2U3VSN6	A0A2U3WFG6	Bloom syndrome protein isoform X1.	Structural maintenance of chromosomes protein 6.	0.693
BLM	SUMO1	A0A2U3VSN6	A0A2U3VFM0	Bloom syndrome protein isoform X1.	Small ubiquitin-related modifier.	0.476
BLM	SUMO2	A0A2U3VSN6	A0A2U3VHV1	Bloom syndrome protein isoform X1.	Small ubiquitin-related modifier.	0.534
BLM	SUMO3	A0A2U3VSN6	A0A2U3WNW5	Bloom syndrome protein isoform X1.	Small ubiquitin-related modifier.	0.534
BLM	UBE2I	A0A2U3VSN6	A0A2U3W4Y3	Bloom syndrome protein isoform X1.	SUMO-conjugating enzyme UBC9 isoform X1; Belongs to the ubiquitin-conjugating enzyme family.	0.672
BMI1	CBX2	A0A2U3ZM74	A0A2U3W8J9	Polycomb complex protein BMI-1 isoform X1.	Chromobox protein homolog 2.	0.958
BMI1	CBX4	A0A2U3ZM74	A0A2U3W8J3	Polycomb complex protein BMI-1 isoform X1.	E3 SUMO-protein ligase CBX4.	0.975