STRINGSTRING
IK IK HNRNPA0 HNRNPA0 SNRPB SNRPB RBM8A RBM8A LOC101373629 LOC101373629 POLR2A POLR2A YBX2 YBX2 SNRNP27 SNRNP27 PCBP1 PCBP1 DHX33 DHX33 SNRPG SNRPG UBL5 UBL5 SRRT SRRT PRKRIP1 PRKRIP1 SRRM3 SRRM3 CCDC12 CCDC12 POLR2J POLR2J LOC101362825 LOC101362825 RBM6 RBM6 SNW1 SNW1 RBM5 RBM5 RBM25 RBM25 NSRP1 NSRP1 PNN PNN SNRNP200 SNRNP200 ZMAT5 ZMAT5 SF3A1 SF3A1 LOC101379623 LOC101379623 FAM193B FAM193B CWF19L2 CWF19L2 PUF60 PUF60 SNRPD3 SNRPD3 PRPF38A PRPF38A RBMX2 RBMX2 DQX1 DQX1 LOC101375744 LOC101375744 GCFC2 GCFC2 HNRNPA2B1 HNRNPA2B1 LOC101383928 LOC101383928 PTBP3 PTBP3 PQBP1 PQBP1 CIRBP CIRBP TMIGD2 TMIGD2 LUC7L3 LUC7L3 LOC101376975 LOC101376975 SRRM1 SRRM1 LOC101371032 LOC101371032 LOC101372568 LOC101372568 RBM7 RBM7 SRSF6 SRSF6 DAW1 DAW1 LOC101368226 LOC101368226 LOC101380875 LOC101380875 ZNF830 ZNF830 NKAPL NKAPL TXNL4A TXNL4A CDC5L CDC5L HNRNPAB HNRNPAB SKIV2L2 SKIV2L2 SRSF10 SRSF10 HNRNPR HNRNPR PRPF40A PRPF40A LOC101385960 LOC101385960 PPP1R8 PPP1R8 POLR2B POLR2B CASC3 CASC3 SF3B6 SF3B6 CWC25 CWC25 GTF2F1 GTF2F1 CCDC94 CCDC94 LSM7 LSM7 SRSF4 SRSF4 RBMXL2 RBMXL2 LOC101376101 LOC101376101 SRSF2 SRSF2 PLRG1 PLRG1 BUD31 BUD31 SART1 SART1 RALYL RALYL HNRNPH3 HNRNPH3 CCAR1 CCAR1 SF3B1 SF3B1 PPIL3 PPIL3 SDE2 SDE2 LOC101368971 LOC101368971 TXNL4B TXNL4B SF3B3 SF3B3 RBM39 RBM39 LOC101380831 LOC101380831 SNRPB2 SNRPB2 LOC101380375 LOC101380375 LOC101382513 LOC101382513 SNRPN SNRPN LOC101369699 LOC101369699 BUD13 BUD13 USP39 USP39 DHX35 DHX35 LSM2 LSM2 SNRNP70 SNRNP70 FAM50A FAM50A LSM5 LSM5 SNRPF SNRPF MAGOH MAGOH HNRNPU HNRNPU PPIL2 PPIL2 DDX23 DDX23 DHX34 DHX34 SNRPD2 SNRPD2 CARHSP1 CARHSP1 BCAS2 BCAS2 SAP18 SAP18 DDX41 DDX41 ACIN1 ACIN1 HNRNPC HNRNPC PPWD1 PPWD1 CWC27 CWC27 SREK1 SREK1 POLR2K POLR2K LOC101375942 LOC101375942 SNIP1 SNIP1 PPIE PPIE RBM22 RBM22 PRCC PRCC DHX15 DHX15 SNRNP25 SNRNP25 RNPS1 RNPS1 HNRNPA3 HNRNPA3 CWC22 CWC22 POLR2L POLR2L WDR70 WDR70 PPIL4 PPIL4 SF3B4 SF3B4 SRSF12 SRSF12 DHX32 DHX32 ALYREF ALYREF EIF4A3 EIF4A3 FAM32A FAM32A LSM4 LSM4 SUGP1 SUGP1 TM6SF2 TM6SF2 CHERP CHERP SLU7 SLU7 SRSF1 SRSF1 UPF3B UPF3B NKAP NKAP RNF113A RNF113A LOC101370336 LOC101370336 GPATCH1 GPATCH1 SNRPA1 SNRPA1 SNRNP48 SNRNP48 HNRNPA1 HNRNPA1 PCBP2 PCBP2 PAXBP1 PAXBP1 SNRNP40 SNRNP40 U2AF1 U2AF1 PPIH PPIH CDC40 CDC40 POLR2H POLR2H WBP11 WBP11 LOC101377041 LOC101377041 DHX8 DHX8 TPRG1L TPRG1L HNRNPK HNRNPK SYNCRIP SYNCRIP ZNF318 ZNF318 LSM8 LSM8 GTF2F2 GTF2F2 POLR2D POLR2D AQR AQR DHX16 DHX16 PRPF18 PRPF18 PRR3 PRR3 PTBP2 PTBP2 PDCD7 PDCD7 LENG1 LENG1 PPIL1 PPIL1 SRSF7 SRSF7 HNRNPLL HNRNPLL PRPF19 PRPF19 PRPF6 PRPF6 HNRNPF HNRNPF POLR2F POLR2F LOC101376553 LOC101376553 MAGOHB MAGOHB YBX3 YBX3 SNRPD1 SNRPD1 MFAP1 MFAP1 PCBP4 PCBP4 SMNDC1 SMNDC1 LSM6 LSM6 RBM17 RBM17 XAB2 XAB2 HNRNPM HNRNPM CWC15 CWC15 TFIP11 TFIP11 TPRG1 TPRG1 LOC101376578 LOC101376578 TRA2B TRA2B HSPA8 HSPA8 HNRNPUL2 HNRNPUL2 POLR2G POLR2G NKTR NKTR RNPC3 RNPC3 LOC101373032 LOC101373032 LOC101372449 LOC101372449 PRPF4B PRPF4B RBM41 RBM41 FAM50B FAM50B RALY RALY LOC101376864 LOC101376864 LOC101374449 LOC101374449 SMU1 SMU1 NCBP1 NCBP1 NCBP2 NCBP2 WDR53 WDR53 HNRNPD HNRNPD LRRC51 LRRC51 HNRNPH2 HNRNPH2 LOC101378830 LOC101378830 LOC101377293 LOC101377293 LOC101386064 LOC101386064 LOC101376302 LOC101376302 ZRSR2 ZRSR2 LOC101364271 LOC101364271 SF3B2 SF3B2 SF1 SF1 LOC101375333 LOC101375333 LOC101378803 LOC101378803 TCERG1 TCERG1 LOC101368296 LOC101368296 PARPBP PARPBP CRNKL1 CRNKL1 NOL8 NOL8 HNRNPH1 HNRNPH1 LOC105758022 LOC105758022 HTATSF1 HTATSF1 RBMX RBMX PRPF31 PRPF31 DHX38 DHX38 PCBP3 PCBP3 SRSF3 SRSF3 CTNNBL1 CTNNBL1 SNRPC SNRPC SRSF11 SRSF11 EFTUD2 EFTUD2 DDX42 DDX42 YBX1 YBX1 LOC101380518 LOC101380518 WBP4 WBP4 SNRPE SNRPE U2AF2 U2AF2 DDX5 DDX5 DDX46 DDX46 SUGP2 SUGP2 PRPF3 PRPF3 PRPF8 PRPF8 LOC105757516 LOC105757516 SRRM2 SRRM2 LUC7L LUC7L SF3A3 SF3A3 SYF2 SYF2 SF3A2 SF3A2 POLR2E POLR2E PTBP1 PTBP1 CACTIN CACTIN WDR25 WDR25 LSM3 LSM3 POLR2C POLR2C ISY1 ISY1 SNRNP35 SNRNP35 ZCRB1 ZCRB1 HNRNPUL1 HNRNPUL1 SNRPA SNRPA HNRNPL HNRNPL POLR2I POLR2I U2AF1L4 U2AF1L4 RBM42 RBM42 SRSF9 SRSF9 RBM10 RBM10 RBM3 RBM3 GPKOW GPKOW DHX9 DHX9 PPIG PPIG PRPF4 PRPF4 LOC101375442 LOC101375442 SF3B5 SF3B5 FUS FUS TRA2A TRA2A CSDC2 CSDC2 NHP2L1 NHP2L1 U2SURP U2SURP PHF5A PHF5A DNAJC8 DNAJC8 SRSF5 SRSF5 ZMAT2 ZMAT2 LIN28B LIN28B
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
IKProtein Red. (563 aa)
HNRNPA0Heterogeneous nuclear ribonucleoprotein A0. (308 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
LOC101373629Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (123 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
YBX2Y-box-binding protein 2. (359 aa)
SNRNP27U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein. (155 aa)
PCBP1poly(RC)-binding protein 1 isoform X1. (356 aa)
DHX33Putative ATP-dependent RNA helicase DHX33 isoform X1. (697 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
UBL5Ubiquitin-like protein 5. (73 aa)
SRRTSerrate RNA effector molecule homolog. (872 aa)
PRKRIP1PRKR-interacting protein 1. (185 aa)
SRRM3Serine/arginine repetitive matrix protein 3. (593 aa)
CCDC12Coiled-coil domain-containing protein 12. (166 aa)
POLR2JDNA-directed RNA polymerase II subunit RPB11-a isoform X1. (127 aa)
LOC101362825Uroplakin-3b-like protein. (252 aa)
RBM6RNA-binding protein 6 isoform X1. (1122 aa)
SNW1SNW domain-containing protein 1 isoform X1. (536 aa)
RBM5RNA-binding protein 5 isoform X1. (841 aa)
RBM25RNA-binding protein 25. (843 aa)
NSRP1Nuclear speckle splicing regulatory protein 1 isoform X1. (568 aa)
PNNPinin isoform X1. (753 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2136 aa)
ZMAT5Zinc finger matrin-type protein 5. (170 aa)
SF3A1Splicing factor 3A subunit 1. (793 aa)
LOC101379623LOW QUALITY PROTEIN: RNA-binding motif protein, X-linked 2-like. (322 aa)
FAM193BProtein FAM193B. (785 aa)
CWF19L2CWF19-like protein 2. (1062 aa)
PUF60poly(U)-binding-splicing factor PUF60 isoform X1. (567 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
PRPF38Apre-mRNA-splicing factor 38A isoform X1. (319 aa)
RBMX2RNA-binding motif protein, X-linked 2. (296 aa)
DQX1ATP-dependent RNA helicase DQX1. (719 aa)
LOC101375744LOW QUALITY PROTEIN: heat shock cognate 71 kDa protein-like; Belongs to the heat shock protein 70 family. (656 aa)
GCFC2GC-rich sequence DNA-binding factor 2 isoform X1. (783 aa)
HNRNPA2B1Heterogeneous nuclear ribonucleoproteins A2/B1. (353 aa)
LOC101383928LOW QUALITY PROTEIN: splicing factor 1-like. (639 aa)
PTBP3LOW QUALITY PROTEIN: polypyrimidine tract-binding protein 3. (591 aa)
PQBP1Polyglutamine-binding protein 1 isoform X1. (265 aa)
CIRBPCold-inducible RNA-binding protein isoform X1. (185 aa)
TMIGD2Transmembrane and immunoglobulin domain-containing protein 2. (340 aa)
LUC7L3Luc7-like protein 3 isoform X1. (489 aa)
LOC101376975pre-mRNA-splicing factor SYF2-like. (265 aa)
SRRM1Serine/arginine repetitive matrix protein 1. (783 aa)
LOC101371032LOW QUALITY PROTEIN: nuclease-sensitive element-binding protein 1-like. (324 aa)
LOC101372568RNA-binding protein 41. (228 aa)
RBM7RNA-binding protein 7 isoform X1. (263 aa)
SRSF6Serine/arginine-rich splicing factor 6. (344 aa)
DAW1Dynein assembly factor with WDR repeat domains 1. (362 aa)
LOC101368226SRA stem-loop-interacting RNA-binding protein, mitochondrial. (111 aa)
LOC101380875Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
ZNF830Zinc finger protein 830. (369 aa)
NKAPLNKAP-like protein. (397 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
CDC5LCell division cycle 5-like protein isoform X1. (802 aa)
HNRNPABHeterogeneous nuclear ribonucleoprotein A/B isoform X1. (330 aa)
SKIV2L2Superkiller viralicidic activity 2-like 2 isoform X1. (1042 aa)
SRSF10Serine/arginine-rich splicing factor 10 isoform X1. (262 aa)
HNRNPRHeterogeneous nuclear ribonucleoprotein R isoform X1. (633 aa)
PRPF40Apre-mRNA-processing factor 40 homolog A isoform X1. (994 aa)
LOC101385960Heterogeneous nuclear ribonucleoprotein K-like. (466 aa)
PPP1R8Nuclear inhibitor of protein phosphatase 1 isoform X1. (351 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
CASC3Protein CASC3. (703 aa)
SF3B6Splicing factor 3B subunit 6. (125 aa)
CWC25pre-mRNA-splicing factor CWC25 homolog. (425 aa)
GTF2F1Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (517 aa)
CCDC94Coiled-coil domain-containing protein 94. (324 aa)
LSM7U6 snRNA-associated Sm-like protein LSm7. (103 aa)
SRSF4Serine/arginine-rich splicing factor 4. (486 aa)
RBMXL2RNA-binding motif protein, X-linked-like-2. (393 aa)
LOC101376101Heterogeneous nuclear ribonucleoprotein A1-like. (318 aa)
SRSF2Serine/arginine-rich splicing factor 2. (221 aa)
PLRG1Pleiotropic regulator 1 isoform X1. (515 aa)
BUD31Protein BUD31 homolog. (144 aa)
SART1U4/U6.U5 tri-snRNP-associated protein 1 isoform X1. (806 aa)
RALYLRNA-binding Raly-like protein isoform X1. (293 aa)
HNRNPH3Heterogeneous nuclear ribonucleoprotein H3 isoform X1. (346 aa)
CCAR1Cell division cycle and apoptosis regulator protein 1. (1150 aa)
SF3B1Splicing factor 3B subunit 1 isoform X1. (1304 aa)
PPIL3Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (161 aa)
SDE2Protein SDE2 homolog. (480 aa)
LOC101368971Heterogeneous nuclear ribonucleoprotein A1-like. (320 aa)
TXNL4BThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
SF3B3Splicing factor 3B subunit 3. (1217 aa)
RBM39RNA-binding protein 39 isoform X2. (530 aa)
LOC101380831Heterogeneous nuclear ribonucleoprotein A1-like. (199 aa)
SNRPB2U2 small nuclear ribonucleoprotein B'' isoform X1. (225 aa)
LOC101380375Dynein assembly factor with WDR repeat domains 1. (219 aa)
LOC101382513RNA-binding motif protein, X chromosome-like. (225 aa)
SNRPNSmall nuclear ribonucleoprotein-associated protein. (240 aa)
LOC101369699RNA-binding motif protein, X chromosome-like. (391 aa)
BUD13BUD13 homolog. (490 aa)
USP39U4/U6.U5 tri-snRNP-associated protein 2 isoform X1. (565 aa)
DHX35Probable ATP-dependent RNA helicase DHX35 isoform X1. (708 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
SNRNP70U1 small nuclear ribonucleoprotein 70 kDa isoform X1. (438 aa)
FAM50AProtein FAM50A. (339 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
SNRPFSmall nuclear ribonucleoprotein F. (86 aa)
MAGOHProtein mago nashi homolog. (146 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U isoform X1. (825 aa)
PPIL2Peptidyl-prolyl cis-trans isomerase-like 2 isoform X1. (522 aa)
DDX23Probable ATP-dependent RNA helicase DDX23. (820 aa)
DHX34Probable ATP-dependent RNA helicase DHX34. (1139 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
CARHSP1Calcium-regulated heat stable protein 1. (147 aa)
BCAS2pre-mRNA-splicing factor SPF27. (225 aa)
SAP18Histone deacetylase complex subunit SAP18. (172 aa)
DDX41Probable ATP-dependent RNA helicase DDX41 isoform X1. (622 aa)
ACIN1Apoptotic chromatin condensation inducer in the nucleus isoform X1. (1340 aa)
HNRNPCHeterogeneous nuclear ribonucleoproteins C1/C2 isoform X1. (307 aa)
PPWD1Peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform X1. (646 aa)
CWC27Peptidyl-prolyl cis-trans isomerase CWC27 homolog isoform X1. (472 aa)
SREK1Splicing regulatory glutamine/lysine-rich protein 1 isoform X1. (622 aa)
POLR2KDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
LOC101375942RING finger protein 113A-like. (344 aa)
SNIP1Smad nuclear-interacting protein 1. (397 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
RBM22pre-mRNA-splicing factor RBM22. (419 aa)
PRCCProline-rich protein PRCC. (491 aa)
DHX15pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. (795 aa)
SNRNP25U11/U12 small nuclear ribonucleoprotein 25 kDa protein. (123 aa)
RNPS1RNA-binding protein with serine-rich domain 1 isoform X1. (305 aa)
HNRNPA3Heterogeneous nuclear ribonucleoprotein A3. (378 aa)
CWC22pre-mRNA-splicing factor CWC22 homolog isoform X1. (908 aa)
POLR2LDNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
WDR70WD repeat-containing protein 70 isoform X1. (654 aa)
PPIL4Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (492 aa)
SF3B4Splicing factor 3B subunit 4. (424 aa)
SRSF12Serine/arginine-rich splicing factor 12. (268 aa)
DHX32Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32. (745 aa)
ALYREFTHO complex subunit 4. (255 aa)
EIF4A3Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (411 aa)
FAM32AProtein FAM32A. (112 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
SUGP1SURP and G-patch domain-containing protein 1. (636 aa)
TM6SF2Transmembrane 6 superfamily member 2. (376 aa)
CHERPCalcium homeostasis endoplasmic reticulum protein. (872 aa)
SLU7pre-mRNA-splicing factor SLU7. (633 aa)
SRSF1Serine/arginine-rich splicing factor 1. (248 aa)
UPF3BRegulator of nonsense transcripts 3B isoform X1. (489 aa)
NKAPNF-kappa-B-activating protein. (418 aa)
RNF113ARING finger protein 113A. (344 aa)
LOC101370336UPF0428 protein CXorf56 homolog isoform X1. (222 aa)
GPATCH1G patch domain-containing protein 1. (932 aa)
SNRPA1U2 small nuclear ribonucleoprotein A. (255 aa)
SNRNP48U11/U12 small nuclear ribonucleoprotein 48 kDa protein. (338 aa)
HNRNPA1Heterogeneous nuclear ribonucleoprotein A1 isoform X1. (373 aa)
PCBP2poly(RC)-binding protein 2 isoform X1. (362 aa)
PAXBP1PAX3- and PAX7-binding protein 1. (918 aa)
SNRNP40U5 small nuclear ribonucleoprotein 40 kDa protein. (358 aa)
U2AF1Splicing factor U2AF 35 kDa subunit isoform X1. (240 aa)
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
CDC40pre-mRNA-processing factor 17. (579 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
WBP11WW domain-binding protein 11. (641 aa)
LOC101377041Leucine-rich repeat-containing protein C10orf11 homolog. (172 aa)
DHX8ATP-dependent RNA helicase DHX8. (1220 aa)
TPRG1LTumor protein p63-regulated gene 1-like protein. (268 aa)
HNRNPKHeterogeneous nuclear ribonucleoprotein K isoform X1. (464 aa)
SYNCRIPHeterogeneous nuclear ribonucleoprotein Q isoform X1. (623 aa)
ZNF318Zinc finger protein 318. (2283 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
GTF2F2General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (249 aa)
POLR2DDNA-directed RNA polymerase II subunit RPB4. (142 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1491 aa)
DHX16Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (1043 aa)
PRPF18pre-mRNA-splicing factor 18. (342 aa)
PRR3Proline-rich protein 3 isoform X1. (249 aa)
PTBP2Polypyrimidine tract-binding protein 2 isoform X1. (540 aa)
PDCD7Programmed cell death protein 7. (486 aa)
LENG1Leukocyte receptor cluster member 1. (282 aa)
PPIL1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
SRSF7Serine/arginine-rich splicing factor 7 isoform X1. (238 aa)
HNRNPLLHeterogeneous nuclear ribonucleoprotein L-like isoform X1. (543 aa)
PRPF19pre-mRNA-processing factor 19. (504 aa)
PRPF6pre-mRNA-processing factor 6 isoform X1. (941 aa)
HNRNPFHeterogeneous nuclear ribonucleoprotein F. (414 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (127 aa)
LOC101376553Heterogeneous nuclear ribonucleoprotein H-like. (452 aa)
MAGOHBProtein mago nashi homolog 2 isoform X1. (148 aa)
YBX3Y-box-binding protein 3 isoform X1. (375 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
MFAP1Microfibrillar-associated protein 1. (439 aa)
PCBP4poly(RC)-binding protein 4. (403 aa)
SMNDC1Survival of motor neuron-related-splicing factor 30. (190 aa)
LSM6U6 snRNA-associated Sm-like protein LSm6. (80 aa)
RBM17Splicing factor 45. (401 aa)
XAB2pre-mRNA-splicing factor SYF1. (855 aa)
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (712 aa)
CWC15Spliceosome-associated protein CWC15 homolog. (231 aa)
TFIP11Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Intron turnover seems to proceed through reactions in two lariat-intron associated complexes termed Intron Large (IL) and Intron Small (IS). In cooperation with DHX15 seems to mediate the transition of the U2, U5 and U6 snRNP- containing IL complex to the snRNP-free IS complex leading to efficient debranching and turnover of excised introns. May play a role in the differentiation of ameloblasts and odontoblasts or in the forming of the enamel extrac [...] (837 aa)
TPRG1Tumor protein p63-regulated gene 1 protein. (280 aa)
LOC101376578Small nuclear ribonucleoprotein F-like. (86 aa)
TRA2BTransformer-2 protein homolog beta isoform X1. (290 aa)
HSPA8Heat shock cognate 71 kDa protein isoform X1; Belongs to the heat shock protein 70 family. (654 aa)
HNRNPUL2Heterogeneous nuclear ribonucleoprotein U-like protein 2. (748 aa)
POLR2GDNA-directed RNA polymerase II subunit RPB7. (172 aa)
NKTRNK-tumor recognition protein isoform X1. (1457 aa)
RNPC3RNA-binding protein 40 isoform X1. (518 aa)
LOC101373032Heterogeneous nuclear ribonucleoproteins A2/B1-like isoform X1. (341 aa)
LOC101372449Putative RNA-binding protein Luc7-like 2 isoform X1. (392 aa)
PRPF4BSerine/threonine-protein kinase PRP4 homolog. (1041 aa)
RBM41RNA-binding protein 41. (269 aa)
FAM50BProtein FAM50B. (335 aa)
RALYRNA-binding protein Raly isoform X1. (293 aa)
LOC101376864Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
LOC101374449Uncharacterized protein C9orf78 homolog isoform X1. (289 aa)
SMU1WD40 repeat-containing protein SMU1. (513 aa)
NCBP1Nuclear cap-binding protein subunit 1. (790 aa)
NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
WDR53WD repeat-containing protein 53. (357 aa)
HNRNPDHeterogeneous nuclear ribonucleoprotein D0 isoform X1. (356 aa)
LRRC51Leucine rich repeat containing 51 isoform X1. (192 aa)
HNRNPH2Heterogeneous nuclear ribonucleoprotein H2. (432 aa)
LOC101378830LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein C-like. (294 aa)
LOC101377293LOW QUALITY PROTEIN: CWF19-like protein 2. (896 aa)
LOC101386064LOW QUALITY PROTEIN: pre-mRNA-processing factor 40 homolog A-like. (914 aa)
LOC101376302LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like. (911 aa)
ZRSR2U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2. (513 aa)
LOC101364271Uncharacterized protein LOC101364271. (324 aa)
SF3B2Splicing factor 3B subunit 2 isoform X1. (896 aa)
SF1Splicing factor 1. (689 aa)
LOC101375333RNA-binding motif protein, X chromosome-like. (267 aa)
LOC101378803Heterogeneous nuclear ribonucleoprotein A1-like. (298 aa)
TCERG1Transcription elongation regulator 1 isoform X1. (1103 aa)
LOC101368296LOW QUALITY PROTEIN: poly(RC)-binding protein 2-like. (443 aa)
PARPBPPCNA-interacting partner. (578 aa)
CRNKL1LOW QUALITY PROTEIN: crooked neck-like protein 1. (829 aa)
NOL8Nucleolar protein 8. (1125 aa)
HNRNPH1Heterogeneous nuclear ribonucleoprotein H isoform X1. (472 aa)
LOC105758022Heterogeneous nuclear ribonucleoprotein A3-like isoform X1. (355 aa)
HTATSF1HIV Tat-specific factor 1 isoform X1. (767 aa)
RBMXRNA-binding motif protein, X chromosome isoform X1. (391 aa)
PRPF31U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1. (499 aa)
DHX38pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1239 aa)
PCBP3poly(RC)-binding protein 3 isoform X1. (393 aa)
SRSF3Serine/arginine-rich splicing factor 3 isoform X1. (176 aa)
CTNNBL1Beta-catenin-like protein 1 isoform X1. (569 aa)
SNRPCU1 small nuclear ribonucleoprotein C isoform X1. (171 aa)
SRSF11Serine/arginine-rich splicing factor 11 isoform X1. (490 aa)
EFTUD2116 kDa U5 small nuclear ribonucleoprotein component isoform X1. (972 aa)
DDX42ATP-dependent RNA helicase DDX42. (934 aa)
YBX1Nuclease-sensitive element-binding protein 1. (466 aa)
LOC101380518Heterogeneous nuclear ribonucleoprotein A1-like. (299 aa)
WBP4WW domain-binding protein 4 isoform X1. (392 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (94 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (475 aa)
DDX5Probable ATP-dependent RNA helicase DDX5 isoform X1; Belongs to the DEAD box helicase family. (614 aa)
DDX46Probable ATP-dependent RNA helicase DDX46 isoform X1. (1032 aa)
SUGP2SURP and G-patch domain-containing protein 2 isoform X1. (1111 aa)
PRPF3U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1. (683 aa)
PRPF8pre-mRNA-processing-splicing factor 8. (2335 aa)
LOC105757516U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein. (469 aa)
SRRM2Serine/arginine repetitive matrix protein 2. (195 aa)
LUC7LPutative RNA-binding protein Luc7-like 1 isoform X1. (377 aa)
SF3A3Splicing factor 3A subunit 3 isoform X1. (583 aa)
SYF2pre-mRNA-splicing factor SYF2. (246 aa)
SF3A2Splicing factor 3A subunit 2. (471 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1. (210 aa)
PTBP1Polypyrimidine tract-binding protein 1 isoform X1. (557 aa)
CACTINCactin. (750 aa)
WDR25WD repeat-containing protein 25. (539 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
POLR2CDNA-directed RNA polymerase II subunit RPB3. (275 aa)
ISY1pre-mRNA-splicing factor ISY1 homolog. (285 aa)
SNRNP35U11/U12 small nuclear ribonucleoprotein 35 kDa protein. (246 aa)
ZCRB1Zinc finger CCHC-type and RNA-binding motif-containing protein 1. (217 aa)
HNRNPUL1Heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1. (856 aa)
SNRPAU1 small nuclear ribonucleoprotein A. (282 aa)
HNRNPLHeterogeneous nuclear ribonucleoprotein L isoform X1. (587 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
U2AF1L4Splicing factor U2AF 26 kDa subunit isoform X1. (240 aa)
RBM42RNA-binding protein 42 isoform X1. (477 aa)
SRSF9Serine/arginine-rich splicing factor 9. (221 aa)
RBM10RNA-binding protein 10 isoform X1. (1061 aa)
RBM3RNA-binding protein 3. (156 aa)
GPKOWG patch domain and KOW motifs-containing protein isoform X1. (481 aa)
DHX9ATP-dependent RNA helicase A isoform X1. (1277 aa)
PPIGPeptidyl-prolyl cis-trans isomerase G isoform X1. (753 aa)
PRPF4U4/U6 small nuclear ribonucleoprotein Prp4. (521 aa)
LOC101375442Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
FUSRNA-binding protein FUS isoform X1. (509 aa)
TRA2ATransformer-2 protein homolog alpha isoform X1. (281 aa)
CSDC2Cold shock domain-containing protein C2. (153 aa)
NHP2L1Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (163 aa)
U2SURPU2 snRNP-associated SURP motif-containing protein. (1029 aa)
PHF5APHD finger-like domain-containing protein 5A. (110 aa)
DNAJC8dnaJ homolog subfamily C member 8 isoform X1. (253 aa)
SRSF5Serine/arginine-rich splicing factor 5 isoform X1. (272 aa)
ZMAT2Zinc finger matrin-type protein 2. (199 aa)
LIN28BProtein lin-28 homolog B isoform X1. (257 aa)
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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