STRINGSTRING
WRAP53 WRAP53 LOC101373735 LOC101373735 LOC101370818 LOC101370818 LOC101369930 LOC101369930 RPA1 RPA1 CHTF18 CHTF18 OBFC1 OBFC1 CDK2 CDK2 HJURP HJURP RFC1 RFC1 RPA2 RPA2 LOC105757102 LOC105757102 LOC101375647 LOC101375647 CENPI CENPI LOC101372477 LOC101372477 LOC101369718 LOC101369718 RFC3 RFC3 LOC101371079 LOC101371079 LOC101375061 LOC101375061 LOC101375640 LOC101375640 NHP2 NHP2 TRUB1 TRUB1 LOC101375053 LOC101375053 LOC101374474 LOC101374474 LOC101372592 LOC101372592 PIF1 PIF1 PPP6R2 PPP6R2 POLD1 POLD1 RTEL1 RTEL1 RPA4 RPA4 CENPU CENPU LOC101374838 LOC101374838 RFC4 RFC4 LOC101369784 LOC101369784 LOC101367710 LOC101367710 LOC101364558 LOC101364558 LOC105758218 LOC105758218 LOC105758220 LOC105758220 LOC101382005 LOC101382005 LOC105758219 LOC105758219 LOC101366452 LOC101366452 LOC101362303 LOC101362303 LOC105758316 LOC105758316 LOC101375641 LOC101375641 POLD4 POLD4 POT1 POT1 LOC105758430 LOC105758430 LOC101370014 LOC101370014 LOC101372564 LOC101372564 LOC101370304 LOC101370304 LOC101374765 LOC101374765 LOC101366939 LOC101366939 LOC101386168 LOC101386168 RUVBL2 RUVBL2 MIS18BP1 MIS18BP1 DKC1 DKC1 CENPQ CENPQ POLD2 POLD2 LOC101382592 LOC101382592 LOC101386837 LOC101386837 ITGB3BP ITGB3BP RBBP7 RBBP7 TERF2IP TERF2IP LOC101379964 LOC101379964 LOC101378601 LOC101378601 DSCC1 DSCC1 LOC101379471 LOC101379471 LOC101379179 LOC101379179 LOC101378012 LOC101378012 TERT TERT ATRX ATRX GAR1 GAR1 LOC101386320 LOC101386320 FEN1 FEN1 RBPMS2 RBPMS2 CENPL CENPL ANKRD28 ANKRD28 ANKRD66 ANKRD66 WRN WRN DAXX DAXX SMARCA5 SMARCA5 LOC101379740 LOC101379740 LOC101380025 LOC101380025 LOC101382175 LOC101382175 LOC101364320 LOC101364320 LOC101368730 LOC101368730 LOC101367269 LOC101367269 LOC101368156 LOC101368156 LOC101386510 LOC101386510 LOC101386806 LOC101386806 RBBP4 RBBP4 LOC101371707 LOC101371707 LOC101373166 LOC101373166 LOC101372303 LOC101372303 LOC101370527 LOC101370527 LOC101369635 LOC101369635 LOC101371116 LOC101371116 LOC101371407 LOC101371407 MIS18A MIS18A SHQ1 SHQ1 STRA13 STRA13 LOC101381948 LOC101381948 TERF1 TERF1 CENPW CENPW LOC101382912 LOC101382912 CENPH CENPH MEIOB MEIOB PRIM2 PRIM2 CENPK CENPK TINF2 TINF2 PRIM1 PRIM1 CCNA2 CCNA2 LIG1 LIG1 RECQL4 RECQL4 CASC5 CASC5 OIP5 OIP5 SMARCA1 SMARCA1 CCNA1 CCNA1 RCBTB2 RCBTB2 RCBTB1 RCBTB1 RFC2 RFC2 LOC105757765 LOC105757765 CTC1 CTC1 BLM BLM PCNA PCNA EXD2 EXD2 CENPM CENPM RFC5 RFC5 RUVBL1 RUVBL1 LOC101381236 LOC101381236 RPA3 RPA3 CENPO CENPO CENPA CENPA CDK3 CDK3 TEN1 TEN1 H3F3B H3F3B PPP6R3 PPP6R3 POLA2 POLA2 DNA2 DNA2 CENPP CENPP ACD ACD ANKRD44 ANKRD44 TERF2 TERF2 CENPT CENPT CENPC CENPC PPP6C PPP6C CENPN CENPN NPM1 NPM1 POLD3 POLD3 RSF1 RSF1 LOC101366045 LOC101366045 LOC101373737 LOC101373737
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WRAP53Telomerase Cajal body protein 1. (532 aa)
LOC101373735Late histone H2B.L4-like; Belongs to the histone H2B family. (183 aa)
LOC101370818Histone H2B type F-M-like; Belongs to the histone H2B family. (259 aa)
LOC101369930LOW QUALITY PROTEIN: histone H2B.3-like; Belongs to the histone H2B family. (93 aa)
RPA1Replication protein A subunit; As part of the heterotrimeric replication protein A complex (RPA/RP-A), binds and stabilizes single-stranded DNA intermediates, that form during DNA replication or upon DNA stress. It prevents their reannealing and in parallel, recruits and activates different proteins and complexes involved in DNA metabolism. Thereby, it plays an essential role both in DNA replication and the cellular response to DNA damage. (616 aa)
CHTF18Chromosome transmission fidelity protein 18 homolog isoform X1. (1011 aa)
OBFC1CST complex subunit STN1; Component of the CST complex proposed to act as a specialized replication factor promoting DNA replication under conditions of replication stress or natural replication barriers such as the telomere duplex. The CST complex binds single-stranded DNA with high affinity in a sequence-independent manner, while isolated subunits bind DNA with low affinity by themselves. Initially the CST complex has been proposed to protect telomeres from DNA degradation. However, the CST complex has been shown to be involved in several aspects of telomere replication. (396 aa)
CDK2Cyclin-dependent kinase 2 isoform X1; Belongs to the protein kinase superfamily. (346 aa)
HJURPLOW QUALITY PROTEIN: Holliday junction recognition protein. (818 aa)
RFC1Replication factor C subunit 1. (1154 aa)
RPA2Replication protein A 32 kDa subunit isoform X1. (278 aa)
LOC105757102Replication factor C subunit 5-like. (84 aa)
LOC101375647Histone H2B type W-T-like; Belongs to the histone H2B family. (113 aa)
CENPICentromere protein I. (743 aa)
LOC101372477Late histone H2B.L1-like; Belongs to the histone H2B family. (232 aa)
LOC101369718Serine/threonine-protein phosphatase. (305 aa)
RFC3Replication factor C subunit 3. (356 aa)
LOC101371079Histone-binding protein RBBP4-like. (425 aa)
LOC101375061DNA polymerase alpha catalytic subunit-like. (130 aa)
LOC101375640Histone H2A; Belongs to the histone H2A family. (113 aa)
NHP2Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (153 aa)
TRUB1Probable tRNA pseudouridine synthase 1. (350 aa)
LOC101375053Late histone H2B.L4-like; Belongs to the histone H2B family. (140 aa)
LOC101374474Histone H2B-like; Belongs to the histone H2B family. (164 aa)
LOC101372592LOW QUALITY PROTEIN: late histone H2B.L3-like; Belongs to the histone H2B family. (190 aa)
PIF1ATP-dependent DNA helicase PIF1; DNA-dependent ATPase and 5'-3' DNA helicase required for the maintenance of both mitochondrial and nuclear genome stability. Efficiently unwinds G-quadruplex (G4) DNA structures and forked RNA-DNA hybrids. Resolves G4 structures, preventing replication pausing and double-strand breaks (DSBs) at G4 motifs. Involved in the maintenance of telomeric DNA. Inhibits telomere elongation, de novo telomere formation and telomere addition to DSBs via catalytic inhibition of telomerase. Reduces the processivity of telomerase by displacing active telomerase from DNA [...] (641 aa)
PPP6R2LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 6 regulatory subunit 2. (998 aa)
POLD1DNA polymerase. (1107 aa)
RTEL1Regulator of telomere elongation helicase 1; ATP-dependent DNA helicase implicated in telomere-length regulation, DNA repair and the maintenance of genomic stability. Acts as an anti-recombinase to counteract toxic recombination and limit crossover during meiosis. Regulates meiotic recombination and crossover homeostasis by physically dissociating strand invasion events and thereby promotes noncrossover repair by meiotic synthesis dependent strand annealing (SDSA) as well as disassembly of D loop recombination intermediates. Also disassembles T loops and prevents telomere fragility by [...] (1305 aa)
RPA4Replication protein A 30 kDa subunit. (244 aa)
CENPUCentromere protein U. (442 aa)
LOC101374838Late histone H2B.L4-like; Belongs to the histone H2B family. (157 aa)
RFC4Replication factor C subunit 4. (424 aa)
LOC101369784Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (73 aa)
LOC101367710Histone H2B; Belongs to the histone H2B family. (141 aa)
LOC101364558Histone H2A; Belongs to the histone H2A family. (128 aa)
LOC105758218Late histone H2B.L4-like; Belongs to the histone H2B family. (135 aa)
LOC105758220Late histone H2B.L4-like; Belongs to the histone H2B family. (146 aa)
LOC101382005Late histone H2B.L4-like; Belongs to the histone H2B family. (154 aa)
LOC105758219Histone H2B, sperm-like; Belongs to the histone H2B family. (211 aa)
LOC101366452Late histone H2B.L4-like; Belongs to the histone H2B family. (111 aa)
LOC101362303LOW QUALITY PROTEIN: histone-binding protein RBBP4-like. (425 aa)
LOC105758316Late histone H2B.L4-like; Belongs to the histone H2B family. (126 aa)
LOC101375641DNA polymerase alpha catalytic subunit-like. (340 aa)
POLD4DNA polymerase delta subunit 4 isoform X1. (191 aa)
POT1Protection of telomeres protein 1. (653 aa)
LOC105758430Histone H2B-like; Belongs to the histone H2B family. (146 aa)
LOC101370014Late histone H2B.L4-like; Belongs to the histone H2B family. (138 aa)
LOC101372564DNA polymerase alpha catalytic subunit. (590 aa)
LOC101370304Late histone H2B.L4-like; Belongs to the histone H2B family. (138 aa)
LOC101374765Late histone H2B.L1-like; Belongs to the histone H2B family. (230 aa)
LOC101366939Transcriptional regulator ATRX-like. (259 aa)
LOC101386168Histone H3; Belongs to the histone H3 family. (136 aa)
RUVBL2RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (463 aa)
MIS18BP1Mis18-binding protein 1. (1140 aa)
DKC1H/ACA ribonucleoprotein complex subunit 4 isoform X1. (517 aa)
CENPQCentromere protein Q isoform X1. (268 aa)
POLD2DNA polymerase delta subunit 2. (469 aa)
LOC101382592Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC101386837Histone H2B; Belongs to the histone H2B family. (126 aa)
ITGB3BPCentromere protein R. (138 aa)
RBBP7Histone-binding protein RBBP7 isoform X1. (469 aa)
TERF2IPTelomeric repeat-binding factor 2-interacting protein 1. (401 aa)
LOC101379964Histone H2A; Belongs to the histone H2A family. (143 aa)
LOC101378601Histone H2B type F-M-like; Belongs to the histone H2B family. (226 aa)
DSCC1Sister chromatid cohesion protein DCC1. (392 aa)
LOC101379471Late histone H2B.L4-like; Belongs to the histone H2B family. (190 aa)
LOC101379179Late histone H2B.L4-like; Belongs to the histone H2B family. (118 aa)
LOC101378012Histone H2B-like; Belongs to the histone H2B family. (199 aa)
TERTTelomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. Active in progenitor and cancer cells. Inactive, or very low activity, in normal somatic cells. Catalytic component of the teleromerase holoenzyme complex whose main activity is the elongation of telomeres by acting as a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. Catalyzes the RNA-dependent extension of 3'-chromosomal termini with the 6-nuc [...] (1117 aa)
ATRXTranscriptional regulator ATRX. (2226 aa)
GAR1H/ACA ribonucleoprotein complex subunit; Required for ribosome biogenesis. Part of a complex which catalyzes pseudouridylation of rRNA. This involves the isomerization of uridine such that the ribose is subsequently attached to C5, instead of the normal N1. Pseudouridine ("psi") residues may serve to stabilize the conformation of rRNAs. (211 aa)
LOC101386320Centromere protein S. (165 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (380 aa)
RBPMS2RNA-binding protein with multiple splicing 2. (206 aa)
CENPLCentromere protein L. (346 aa)
ANKRD28Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A isoform X1. (1086 aa)
ANKRD66Ankyrin repeat domain-containing protein 66. (197 aa)
WRNWerner syndrome ATP-dependent helicase. (1405 aa)
DAXXDeath domain-associated protein 6 isoform X1. (757 aa)
SMARCA5SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5. (1052 aa)
LOC101379740Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC101380025Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC101382175Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC101364320DNA polymerase alpha catalytic subunit-like. (694 aa)
LOC101368730Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC101367269Histone H2B; Belongs to the histone H2B family. (122 aa)
LOC101368156Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC101386510Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC101386806Histone H2B; Belongs to the histone H2B family. (127 aa)
RBBP4Histone-binding protein RBBP4. (332 aa)
LOC101371707Histone H2B type F-M-like; Belongs to the histone H2B family. (219 aa)
LOC101373166Late histone H2B.L4-like; Belongs to the histone H2B family. (137 aa)
LOC101372303Late histone H2B.L4-like; Belongs to the histone H2B family. (172 aa)
LOC101370527Late histone H2B.L4-like; Belongs to the histone H2B family. (136 aa)
LOC101369635Late histone H2B.L4-like; Belongs to the histone H2B family. (167 aa)
LOC101371116Late histone H2B.L4-like; Belongs to the histone H2B family. (121 aa)
LOC101371407Late histone H2B.L4-like; Belongs to the histone H2B family. (178 aa)
MIS18AProtein Mis18-alpha. (237 aa)
SHQ1Protein SHQ1 homolog. (575 aa)
STRA13Centromere protein X. (79 aa)
LOC101381948Histone H2B; Belongs to the histone H2B family. (126 aa)
TERF1Telomeric repeat-binding factor; Binds the telomeric double-stranded 5'-TTAGGG-3' repeat. (433 aa)
CENPWCentromere protein W. (88 aa)
LOC101382912Histone H2B subacrosomal variant-like; Belongs to the histone H2B family. (122 aa)
CENPHCentromere protein H. (247 aa)
MEIOBMeiosis-specific with OB domain-containing protein isoform X2. (471 aa)
PRIM2DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. (509 aa)
CENPKCentromere protein K. (273 aa)
TINF2LOW QUALITY PROTEIN: TERF1-interacting nuclear factor 2. (485 aa)
PRIM1DNA primase; Belongs to the eukaryotic-type primase small subunit family. (419 aa)
CCNA2cyclin-A2 isoform X1; Belongs to the cyclin family. (433 aa)
LIG1DNA ligase. (915 aa)
RECQL4ATP-dependent DNA helicase Q4. (1183 aa)
CASC5Protein CASC5. (2352 aa)
OIP5Protein Mis18-beta. (229 aa)
SMARCA1Probable global transcription activator SNF2L1 isoform X1. (1070 aa)
CCNA1cyclin-A1; Belongs to the cyclin family. (421 aa)
RCBTB2RCC1 and BTB domain-containing protein 2 isoform X1. (551 aa)
RCBTB1RCC1 and BTB domain-containing protein 1. (531 aa)
RFC2Replication factor C subunit 2 isoform X1. (368 aa)
LOC105757765Histone H2B; Belongs to the histone H2B family. (126 aa)
CTC1CST complex subunit CTC1. (1217 aa)
BLMBloom syndrome protein isoform X1. (1428 aa)
PCNAProliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (261 aa)
EXD2Exonuclease 3'-5' domain-containing protein 2. (623 aa)
CENPMCentromere protein M isoform X1. (180 aa)
RFC5Replication factor C subunit 5. (336 aa)
RUVBL1RuvB-like helicase; Proposed core component of the chromatin remodeling Ino80 complex which exhibits DNA- and nucleosome-activated ATPase activity and catalyzes ATP-dependent nucleosome sliding. (456 aa)
LOC101381236H/ACA ribonucleoprotein complex subunit 3. (64 aa)
RPA3Replication protein A 14 kDa subunit. (121 aa)
CENPOCentromere protein O. (296 aa)
CENPAHistone H3-like centromeric protein A isoform X1. (137 aa)
CDK3Cyclin-dependent kinase 3; Belongs to the protein kinase superfamily. (305 aa)
TEN1CST complex subunit TEN1. (121 aa)
H3F3BHistone H3; Belongs to the histone H3 family. (136 aa)
PPP6R3Serine/threonine-protein phosphatase 6 regulatory subunit 3 isoform X1. (879 aa)
POLA2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (595 aa)
DNA2DNA replication ATP-dependent helicase/nuclease DNA2. (1020 aa)
CENPPCentromere protein P. (288 aa)
ACDAdrenocortical dysplasia protein homolog. (453 aa)
ANKRD44Serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B. (993 aa)
TERF2Telomeric repeat-binding factor 2 isoform X1. (542 aa)
CENPTCentromere protein T. (557 aa)
CENPCLOW QUALITY PROTEIN: centromere protein C. (950 aa)
PPP6CSerine/threonine-protein phosphatase. (305 aa)
CENPNCentromere protein N isoform X1. (339 aa)
NPM1Nucleophosmin isoform X1. (294 aa)
POLD3LOW QUALITY PROTEIN: DNA polymerase delta subunit 3. (470 aa)
RSF1Remodeling and spacing factor 1. (1435 aa)
LOC101366045Histone H2A; Belongs to the histone H2A family. (128 aa)
LOC101373737Centromere protein P-like. (247 aa)
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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