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NCBP2 NCBP2 NCBP1 NCBP1 LOC101376864 LOC101376864 LOC101380831 LOC101380831 SF3B3 SF3B3 LOC101368971 LOC101368971 SF3B1 SF3B1 SART1 SART1 BUD31 BUD31 PLRG1 PLRG1 SRSF2 SRSF2 LOC101376101 LOC101376101 RBMXL2 RBMXL2 SRSF4 SRSF4 SYF2 SYF2 SRSF10 SRSF10 PRPF40A PRPF40A LOC101385960 LOC101385960 SF3B6 SF3B6 LSM7 LSM7 SF3A2 SF3A2 LSM3 LSM3 ISY1 ISY1 SNRPA SNRPA U2AF1L4 U2AF1L4 SRSF9 SRSF9 PRPF4 PRPF4 LOC101375442 LOC101375442 SF3B5 SF3B5 FUS FUS TRA2A TRA2A NHP2L1 NHP2L1 U2SURP U2SURP PHF5A PHF5A SRSF5 SRSF5 ZMAT2 ZMAT2 SNRPB SNRPB RBM8A RBM8A LOC101373629 LOC101373629 SNRNP27 SNRNP27 PCBP1 PCBP1 SNRPG SNRPG CCDC12 CCDC12 SNW1 SNW1 RBM25 RBM25 SNRNP200 SNRNP200 SF3A1 SF3A1 SNRPF SNRPF MAGOH MAGOH HNRNPU HNRNPU DDX23 DDX23 PRPF40B PRPF40B SNRPD2 SNRPD2 BCAS2 BCAS2 THOC3 THOC3 ACIN1 ACIN1 HNRNPC HNRNPC PPIE PPIE RBM22 RBM22 DHX15 DHX15 HNRNPA3 HNRNPA3 SF3B4 SF3B4 ALYREF ALYREF EIF4A3 EIF4A3 LSM4 LSM4 CHERP CHERP SLU7 SLU7 SRSF1 SRSF1 SNRPA1 SNRPA1 HNRNPA1 HNRNPA1 SNRNP40 SNRNP40 U2AF1 U2AF1 PPIH PPIH CDC40 CDC40 WBP11 WBP11 PRPF38B PRPF38B DHX8 DHX8 HNRNPK HNRNPK LSM8 LSM8 AQR AQR DHX16 DHX16 PRPF18 PRPF18 HSPA2 HSPA2 PPIL1 PPIL1 SRSF7 SRSF7 PRPF19 PRPF19 PRPF6 PRPF6 MAGOHB MAGOHB SNRPD1 SNRPD1 THOC1 THOC1 SMNDC1 SMNDC1 LSM6 LSM6 RBM17 RBM17 XAB2 XAB2 HNRNPM HNRNPM CWC15 CWC15 LOC101376578 LOC101376578 TRA2B TRA2B HSPA8 HSPA8 LOC101375338 LOC101375338 LSM5 LSM5 RP9 RP9 SNRNP70 SNRNP70 LSM2 LSM2 LOC101376406 LOC101376406 USP39 USP39 LOC101369699 LOC101369699 LOC101382513 LOC101382513 SNRPB2 SNRPB2 CDC5L CDC5L TXNL4A TXNL4A LOC101380875 LOC101380875 SRSF6 SRSF6 LOC101376975 LOC101376975 PQBP1 PQBP1 LOC101375744 LOC101375744 PRPF38A PRPF38A SNRPD3 SNRPD3 PUF60 PUF60 THOC2 THOC2 SF3A3 SF3A3 HSPA6 HSPA6 PRPF8 PRPF8 PRPF3 PRPF3 DDX46 DDX46 DDX5 DDX5 U2AF2 U2AF2 SNRPE SNRPE LOC101380518 LOC101380518 DDX42 DDX42 EFTUD2 EFTUD2 CTNNBL1 CTNNBL1 LOC101372213 LOC101372213 SRSF3 SRSF3 LOC101381599 LOC101381599 DHX38 DHX38 PRPF31 PRPF31 RBMX RBMX LOC105758022 LOC105758022 CRNKL1 CRNKL1 TCERG1 TCERG1 LOC101378803 LOC101378803 LOC101375333 LOC101375333 HSPA1L HSPA1L DDX39B DDX39B SF3B2 SF3B2 LOC101386064 LOC101386064 LOC101378830 LOC101378830
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
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experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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NCBP2Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
NCBP1Nuclear cap-binding protein subunit 1. (790 aa)
LOC101376864Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (156 aa)
LOC101380831Heterogeneous nuclear ribonucleoprotein A1-like. (199 aa)
SF3B3Splicing factor 3B subunit 3. (1217 aa)
LOC101368971Heterogeneous nuclear ribonucleoprotein A1-like. (320 aa)
SF3B1Splicing factor 3B subunit 1 isoform X1. (1304 aa)
SART1U4/U6.U5 tri-snRNP-associated protein 1 isoform X1. (806 aa)
BUD31Protein BUD31 homolog. (144 aa)
PLRG1Pleiotropic regulator 1 isoform X1. (515 aa)
SRSF2Serine/arginine-rich splicing factor 2. (221 aa)
LOC101376101Heterogeneous nuclear ribonucleoprotein A1-like. (318 aa)
RBMXL2RNA-binding motif protein, X-linked-like-2. (393 aa)
SRSF4Serine/arginine-rich splicing factor 4. (486 aa)
SYF2pre-mRNA-splicing factor SYF2. (246 aa)
SRSF10Serine/arginine-rich splicing factor 10 isoform X1. (262 aa)
PRPF40Apre-mRNA-processing factor 40 homolog A isoform X1. (994 aa)
LOC101385960Heterogeneous nuclear ribonucleoprotein K-like. (466 aa)
SF3B6Splicing factor 3B subunit 6. (125 aa)
LSM7U6 snRNA-associated Sm-like protein LSm7. (103 aa)
SF3A2Splicing factor 3A subunit 2. (471 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)
ISY1pre-mRNA-splicing factor ISY1 homolog. (285 aa)
SNRPAU1 small nuclear ribonucleoprotein A. (282 aa)
U2AF1L4Splicing factor U2AF 26 kDa subunit isoform X1. (240 aa)
SRSF9Serine/arginine-rich splicing factor 9. (221 aa)
PRPF4U4/U6 small nuclear ribonucleoprotein Prp4. (521 aa)
LOC101375442Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
SF3B5Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
FUSRNA-binding protein FUS isoform X1. (509 aa)
TRA2ATransformer-2 protein homolog alpha isoform X1. (281 aa)
NHP2L1Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (163 aa)
U2SURPU2 snRNP-associated SURP motif-containing protein. (1029 aa)
PHF5APHD finger-like domain-containing protein 5A. (110 aa)
SRSF5Serine/arginine-rich splicing factor 5 isoform X1. (272 aa)
ZMAT2Zinc finger matrin-type protein 2. (199 aa)
SNRPBSmall nuclear ribonucleoprotein-associated protein. (240 aa)
RBM8ARNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
LOC101373629Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (123 aa)
SNRNP27U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein. (155 aa)
PCBP1poly(RC)-binding protein 1 isoform X1. (356 aa)
SNRPGSmall nuclear ribonucleoprotein G; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. (76 aa)
CCDC12Coiled-coil domain-containing protein 12. (166 aa)
SNW1SNW domain-containing protein 1 isoform X1. (536 aa)
RBM25RNA-binding protein 25. (843 aa)
SNRNP200U5 small nuclear ribonucleoprotein 200 kDa helicase. (2136 aa)
SF3A1Splicing factor 3A subunit 1. (793 aa)
SNRPFSmall nuclear ribonucleoprotein F. (86 aa)
MAGOHProtein mago nashi homolog. (146 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U isoform X1. (825 aa)
DDX23Probable ATP-dependent RNA helicase DDX23. (820 aa)
PRPF40Bpre-mRNA-processing factor 40 homolog B isoform X1. (871 aa)
SNRPD2Small nuclear ribonucleoprotein Sm D2; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. (118 aa)
BCAS2pre-mRNA-splicing factor SPF27. (225 aa)
THOC3THO complex subunit 3. (351 aa)
ACIN1Apoptotic chromatin condensation inducer in the nucleus isoform X1. (1340 aa)
HNRNPCHeterogeneous nuclear ribonucleoproteins C1/C2 isoform X1. (307 aa)
PPIEPeptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily. (301 aa)
RBM22pre-mRNA-splicing factor RBM22. (419 aa)
DHX15pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. (795 aa)
HNRNPA3Heterogeneous nuclear ribonucleoprotein A3. (378 aa)
SF3B4Splicing factor 3B subunit 4. (424 aa)
ALYREFTHO complex subunit 4. (255 aa)
EIF4A3Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (411 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (139 aa)
CHERPCalcium homeostasis endoplasmic reticulum protein. (872 aa)
SLU7pre-mRNA-splicing factor SLU7. (633 aa)
SRSF1Serine/arginine-rich splicing factor 1. (248 aa)
SNRPA1U2 small nuclear ribonucleoprotein A. (255 aa)
HNRNPA1Heterogeneous nuclear ribonucleoprotein A1 isoform X1. (373 aa)
SNRNP40U5 small nuclear ribonucleoprotein 40 kDa protein. (358 aa)
U2AF1Splicing factor U2AF 35 kDa subunit isoform X1. (240 aa)
PPIHPeptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (177 aa)
CDC40pre-mRNA-processing factor 17. (579 aa)
WBP11WW domain-binding protein 11. (641 aa)
PRPF38Bpre-mRNA-splicing factor 38B. (549 aa)
DHX8ATP-dependent RNA helicase DHX8. (1220 aa)
HNRNPKHeterogeneous nuclear ribonucleoprotein K isoform X1. (464 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (96 aa)
AQRRNA helicase aquarius; Intron-binding spliceosomal protein required to link pre-mRNA splicing and snoRNP (small nucleolar ribonucleoprotein) biogenesis. Plays a key role in position-dependent assembly of intron-encoded box C/D small snoRNP, splicing being required for snoRNP assembly. May act by helping the folding of the snoRNA sequence. Binds to intron of pre- mRNAs in a sequence-independent manner, contacting the region between snoRNA and the branchpoint of introns (40 nucleotides upstream of the branchpoint) during the late stages of splicing. (1491 aa)
DHX16Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (1043 aa)
PRPF18pre-mRNA-splicing factor 18. (342 aa)
HSPA2Heat shock-related 70 kDa protein 2; Belongs to the heat shock protein 70 family. (638 aa)
PPIL1Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (166 aa)
SRSF7Serine/arginine-rich splicing factor 7 isoform X1. (238 aa)
PRPF19pre-mRNA-processing factor 19. (504 aa)
PRPF6pre-mRNA-processing factor 6 isoform X1. (941 aa)
MAGOHBProtein mago nashi homolog 2 isoform X1. (148 aa)
SNRPD1Small nuclear ribonucleoprotein Sm D1; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. May act as a charged protein scaffold to promote snRNP assembly or strengthen snRNP-snRNP interactions through non-specific electrostatic contacts with RNA. (119 aa)
THOC1THO complex subunit 1. (657 aa)
SMNDC1Survival of motor neuron-related-splicing factor 30. (190 aa)
LSM6U6 snRNA-associated Sm-like protein LSm6. (80 aa)
RBM17Splicing factor 45. (401 aa)
XAB2pre-mRNA-splicing factor SYF1. (855 aa)
HNRNPMHeterogeneous nuclear ribonucleoprotein M. (712 aa)
CWC15Spliceosome-associated protein CWC15 homolog. (231 aa)
LOC101376578Small nuclear ribonucleoprotein F-like. (86 aa)
TRA2BTransformer-2 protein homolog beta isoform X1. (290 aa)
HSPA8Heat shock cognate 71 kDa protein isoform X1; Belongs to the heat shock protein 70 family. (654 aa)
LOC101375338Retinitis pigmentosa 9 protein-like. (220 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (91 aa)
RP9Retinitis pigmentosa 9 protein. (221 aa)
SNRNP70U1 small nuclear ribonucleoprotein 70 kDa isoform X1. (438 aa)
LSM2U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
LOC101376406Heat shock 70 kDa protein 1; Belongs to the heat shock protein 70 family. (641 aa)
USP39U4/U6.U5 tri-snRNP-associated protein 2 isoform X1. (565 aa)
LOC101369699RNA-binding motif protein, X chromosome-like. (391 aa)
LOC101382513RNA-binding motif protein, X chromosome-like. (225 aa)
SNRPB2U2 small nuclear ribonucleoprotein B'' isoform X1. (225 aa)
CDC5LCell division cycle 5-like protein isoform X1. (802 aa)
TXNL4AThioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (142 aa)
LOC101380875Small nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (92 aa)
SRSF6Serine/arginine-rich splicing factor 6. (344 aa)
LOC101376975pre-mRNA-splicing factor SYF2-like. (265 aa)
PQBP1Polyglutamine-binding protein 1 isoform X1. (265 aa)
LOC101375744LOW QUALITY PROTEIN: heat shock cognate 71 kDa protein-like; Belongs to the heat shock protein 70 family. (656 aa)
PRPF38Apre-mRNA-splicing factor 38A isoform X1. (319 aa)
SNRPD3Small nuclear ribonucleoprotein Sm D3; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone pre-mRNA 3'-end processing. (126 aa)
PUF60poly(U)-binding-splicing factor PUF60 isoform X1. (567 aa)
THOC2THO complex subunit 2. (1592 aa)
SF3A3Splicing factor 3A subunit 3 isoform X1. (583 aa)
HSPA6LOW QUALITY PROTEIN: heat shock 70 kDa protein 6; Belongs to the heat shock protein 70 family. (688 aa)
PRPF8pre-mRNA-processing-splicing factor 8. (2335 aa)
PRPF3U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1. (683 aa)
DDX46Probable ATP-dependent RNA helicase DDX46 isoform X1. (1032 aa)
DDX5Probable ATP-dependent RNA helicase DDX5 isoform X1; Belongs to the DEAD box helicase family. (614 aa)
U2AF2U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (475 aa)
SNRPESmall nuclear ribonucleoprotein E; Plays role in pre-mRNA splicing as core component of the SMN- Sm complex that mediates spliceosomal snRNP assembly and as component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Component of both the pre-catalytic spliceosome B complex and activated spliceosome C complexes. Is also a component of the minor U12 spliceosome. As part of the U7 snRNP it is involved in histone 3'-end processing. May indirectly play a role in hair development. (94 aa)
LOC101380518Heterogeneous nuclear ribonucleoprotein A1-like. (299 aa)
DDX42ATP-dependent RNA helicase DDX42. (934 aa)
EFTUD2116 kDa U5 small nuclear ribonucleoprotein component isoform X1. (972 aa)
CTNNBL1Beta-catenin-like protein 1 isoform X1. (569 aa)
LOC101372213RNA-binding motif protein, X chromosome-like. (393 aa)
SRSF3Serine/arginine-rich splicing factor 3 isoform X1. (176 aa)
LOC101381599LOW QUALITY PROTEIN: RNA-binding motif protein, X chromosome-like. (392 aa)
DHX38pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16. (1239 aa)
PRPF31U4/U6 small nuclear ribonucleoprotein Prp31 isoform X1. (499 aa)
RBMXRNA-binding motif protein, X chromosome isoform X1. (391 aa)
LOC105758022Heterogeneous nuclear ribonucleoprotein A3-like isoform X1. (355 aa)
CRNKL1LOW QUALITY PROTEIN: crooked neck-like protein 1. (829 aa)
TCERG1Transcription elongation regulator 1 isoform X1. (1103 aa)
LOC101378803Heterogeneous nuclear ribonucleoprotein A1-like. (298 aa)
LOC101375333RNA-binding motif protein, X chromosome-like. (267 aa)
HSPA1LHeat shock 70 kDa protein 1-like isoform X1; Belongs to the heat shock protein 70 family. (661 aa)
DDX39BSpliceosome RNA helicase DDX39B isoform X1. (442 aa)
SF3B2Splicing factor 3B subunit 2 isoform X1. (896 aa)
LOC101386064LOW QUALITY PROTEIN: pre-mRNA-processing factor 40 homolog A-like. (914 aa)
LOC101378830LOW QUALITY PROTEIN: heterogeneous nuclear ribonucleoprotein C-like. (294 aa)
Your Current Organism:
Odobenus rosmarus
NCBI taxonomy Id: 9708
Other names: O. rosmarus divergens, Odobenus rosmarus divergens, Pacific walrus
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