STRINGSTRING
SNX16 SNX16 LOC102746626 LOC102746626 SNX27 SNX27 VPS26A VPS26A VPS26B VPS26B CCDC53 CCDC53 SNX10 SNX10 SLC31A2 SLC31A2 FKBP15 FKBP15 VPS29 VPS29 SNX12 SNX12 SNX11 SNX11 KIAA0196 KIAA0196 SNX31 SNX31 SNX32 SNX32 LOC102730056 LOC102730056 KIAA1033 KIAA1033 SNX20 SNX20 HS1BP3 HS1BP3 SNX30 SNX30 SNX5 SNX5 LOC102730200 LOC102730200 SNX17 SNX17 VPS35 VPS35 SNX21 SNX21 LOC102731956 LOC102731956 SNX1 SNX1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SNX16Sorting nexin-16. (343 aa)
LOC102746626WASH complex subunit FAM21-like isoform X1. (1340 aa)
SNX27Sorting nexin-27. (541 aa)
VPS26AVacuolar protein sorting-associated protein 26A isoform X1. (360 aa)
VPS26BVacuolar protein sorting-associated protein 26B. (336 aa)
CCDC53WASH complex subunit CCDC53. (194 aa)
SNX10Sorting nexin-10. (201 aa)
SLC31A2Probable low affinity copper uptake protein 2. (140 aa)
FKBP15Peptidylprolyl isomerase. (1207 aa)
VPS29Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. (186 aa)
SNX12Sorting nexin-12. (109 aa)
SNX11Sorting nexin-11. (270 aa)
KIAA0196WASH complex subunit strumpellin isoform X1. (1159 aa)
SNX31Sorting nexin-31. (440 aa)
SNX32Sorting nexin; Involved in several stages of intracellular trafficking. (403 aa)
LOC102730056WAS protein family homolog 1-like isoform X1. (473 aa)
KIAA1033WASH complex subunit 7. (920 aa)
SNX20Sorting nexin-20. (316 aa)
HS1BP3HCLS1-binding protein 3. (385 aa)
SNX30Sorting nexin-30. (437 aa)
SNX5Sorting nexin; Involved in several stages of intracellular trafficking. (404 aa)
LOC102730200Sorting nexin-12-like. (55 aa)
SNX17Sorting nexin-17 isoform X2. (470 aa)
VPS35Vacuolar protein sorting-associated protein 35. (509 aa)
SNX21Sorting nexin-21. (364 aa)
LOC102731956WASH complex subunit 7-like. (180 aa)
SNX1Sorting nexin-1-like. (401 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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