(15 nodes) Myogenesis, and DNA-binding protein inhibitor network (Leptonychotes weddellii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ID1	DNA-binding protein inhibitor ID-1. (154 aa)
	MYOG	Myogenin. (224 aa)
	TCF4	Transcription factor 4. (401 aa)
	LOC102735373	Transcription factor 12-like. (691 aa)
	MYF5	Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (255 aa)
	MYF6	Myogenic factor 6. (242 aa)
	PAX3	Paired box protein Pax-3 isoform X1. (505 aa)
	MEF2B	Myocyte-specific enhancer factor 2B. (368 aa)
	MEF2C	Myocyte-specific enhancer factor 2C-like isoform X2. (473 aa)
	ID2	DNA-binding protein inhibitor ID-2 isoform X2. (134 aa)
	MEF2A	Myocyte-specific enhancer factor 2A isoform X1. (487 aa)
	TCF3	Transcription factor E2-alpha isoform X1. (654 aa)
	LOC102743775	Transcription factor 4-like. (261 aa)
	ASCL2	Achaete-scute homolog 2. (194 aa)
	MYOD1	Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation. (319 aa)

Your Current Organism:

Leptonychotes weddellii

NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ASCL2	LOC102735373	A0A2U3Z2E6	A0A2U3XNI5	Achaete-scute homolog 2.	Transcription factor 12-like.	0.682
ASCL2	LOC102743775	A0A2U3Z2E6	A0A2U3YXY0	Achaete-scute homolog 2.	Transcription factor 4-like.	0.682
ASCL2	TCF3	A0A2U3Z2E6	A0A2U3YQK4	Achaete-scute homolog 2.	Transcription factor E2-alpha isoform X1.	0.682
ASCL2	TCF4	A0A2U3Z2E6	A0A2U3XLB8	Achaete-scute homolog 2.	Transcription factor 4.	0.682
ID1	ID2	A0A2U3X889	A0A2U3YMP3	DNA-binding protein inhibitor ID-1.	DNA-binding protein inhibitor ID-2 isoform X2.	0.841
ID1	LOC102735373	A0A2U3X889	A0A2U3XNI5	DNA-binding protein inhibitor ID-1.	Transcription factor 12-like.	0.605
ID1	LOC102743775	A0A2U3X889	A0A2U3YXY0	DNA-binding protein inhibitor ID-1.	Transcription factor 4-like.	0.605
ID1	MYF5	A0A2U3X889	A0A2U3XU80	DNA-binding protein inhibitor ID-1.	Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation.	0.446
ID1	MYOD1	A0A2U3X889	A0A2U3Z4X5	DNA-binding protein inhibitor ID-1.	Myogenic factor; Induces fibroblasts to differentiate into myoblasts. Acts as a transcriptional activator that promotes transcription of muscle- specific target genes and plays a role in muscle differentiation.	0.723
ID1	TCF3	A0A2U3X889	A0A2U3YQK4	DNA-binding protein inhibitor ID-1.	Transcription factor E2-alpha isoform X1.	0.999
ID1	TCF4	A0A2U3X889	A0A2U3XLB8	DNA-binding protein inhibitor ID-1.	Transcription factor 4.	0.605
ID2	ID1	A0A2U3YMP3	A0A2U3X889	DNA-binding protein inhibitor ID-2 isoform X2.	DNA-binding protein inhibitor ID-1.	0.841
ID2	LOC102735373	A0A2U3YMP3	A0A2U3XNI5	DNA-binding protein inhibitor ID-2 isoform X2.	Transcription factor 12-like.	0.595
ID2	LOC102743775	A0A2U3YMP3	A0A2U3YXY0	DNA-binding protein inhibitor ID-2 isoform X2.	Transcription factor 4-like.	0.595
ID2	MYOG	A0A2U3YMP3	A0A2U3XJX0	DNA-binding protein inhibitor ID-2 isoform X2.	Myogenin.	0.603
ID2	TCF3	A0A2U3YMP3	A0A2U3YQK4	DNA-binding protein inhibitor ID-2 isoform X2.	Transcription factor E2-alpha isoform X1.	0.709
ID2	TCF4	A0A2U3YMP3	A0A2U3XLB8	DNA-binding protein inhibitor ID-2 isoform X2.	Transcription factor 4.	0.595
LOC102735373	ASCL2	A0A2U3XNI5	A0A2U3Z2E6	Transcription factor 12-like.	Achaete-scute homolog 2.	0.682
LOC102735373	ID1	A0A2U3XNI5	A0A2U3X889	Transcription factor 12-like.	DNA-binding protein inhibitor ID-1.	0.605
LOC102735373	ID2	A0A2U3XNI5	A0A2U3YMP3	Transcription factor 12-like.	DNA-binding protein inhibitor ID-2 isoform X2.	0.595