(5 nodes) Golgi 4-transmembrane spanning transporter, and RING finger and transmembrane domain-containing protein 1/2 network (Leptonychotes weddellii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102748670	Lysosomal-associated transmembrane protein 4A-like. (233 aa)
	RNFT1	RING finger and transmembrane domain-containing protein 1. (397 aa)
	LAPTM4B	Lysosomal-associated transmembrane protein 4B. (226 aa)
	RAPGEFL1	Rap guanine nucleotide exchange factor-like 1. (662 aa)
	LOC102732749	Lysosomal-associated transmembrane protein 4A-like. (197 aa)

Your Current Organism:

Leptonychotes weddellii

NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LAPTM4B	LOC102732749	A0A2U3YGB6	A0A2U3Z4K8	Lysosomal-associated transmembrane protein 4B.	Lysosomal-associated transmembrane protein 4A-like.	0.544
LAPTM4B	LOC102748670	A0A2U3YGB6	A0A2U3XWA3	Lysosomal-associated transmembrane protein 4B.	Lysosomal-associated transmembrane protein 4A-like.	0.540
LOC102732749	LAPTM4B	A0A2U3Z4K8	A0A2U3YGB6	Lysosomal-associated transmembrane protein 4A-like.	Lysosomal-associated transmembrane protein 4B.	0.544
LOC102732749	RAPGEFL1	A0A2U3Z4K8	A0A2U3Z1P4	Lysosomal-associated transmembrane protein 4A-like.	Rap guanine nucleotide exchange factor-like 1.	0.536
LOC102732749	RNFT1	A0A2U3Z4K8	A0A2U3Y9H4	Lysosomal-associated transmembrane protein 4A-like.	RING finger and transmembrane domain-containing protein 1.	0.485
LOC102748670	LAPTM4B	A0A2U3XWA3	A0A2U3YGB6	Lysosomal-associated transmembrane protein 4A-like.	Lysosomal-associated transmembrane protein 4B.	0.540
LOC102748670	RAPGEFL1	A0A2U3XWA3	A0A2U3Z1P4	Lysosomal-associated transmembrane protein 4A-like.	Rap guanine nucleotide exchange factor-like 1.	0.536
LOC102748670	RNFT1	A0A2U3XWA3	A0A2U3Y9H4	Lysosomal-associated transmembrane protein 4A-like.	RING finger and transmembrane domain-containing protein 1.	0.485
RAPGEFL1	LOC102732749	A0A2U3Z1P4	A0A2U3Z4K8	Rap guanine nucleotide exchange factor-like 1.	Lysosomal-associated transmembrane protein 4A-like.	0.536
RAPGEFL1	LOC102748670	A0A2U3Z1P4	A0A2U3XWA3	Rap guanine nucleotide exchange factor-like 1.	Lysosomal-associated transmembrane protein 4A-like.	0.536
RAPGEFL1	RNFT1	A0A2U3Z1P4	A0A2U3Y9H4	Rap guanine nucleotide exchange factor-like 1.	RING finger and transmembrane domain-containing protein 1.	0.539
RNFT1	LOC102732749	A0A2U3Y9H4	A0A2U3Z4K8	RING finger and transmembrane domain-containing protein 1.	Lysosomal-associated transmembrane protein 4A-like.	0.485
RNFT1	LOC102748670	A0A2U3Y9H4	A0A2U3XWA3	RING finger and transmembrane domain-containing protein 1.	Lysosomal-associated transmembrane protein 4A-like.	0.485
RNFT1	RAPGEFL1	A0A2U3Y9H4	A0A2U3Z1P4	RING finger and transmembrane domain-containing protein 1.	Rap guanine nucleotide exchange factor-like 1.	0.539