(15 nodes) Threonine protease network (Leptonychotes weddellii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PSMB4	Proteasome subunit beta; Belongs to the peptidase T1B family. (264 aa)
	PSMB10	Proteasome subunit beta. (273 aa)
	PSMA6	Proteasome subunit alpha type. (246 aa)
	LOC102742178	Proteasome subunit alpha type. (234 aa)
	PSMB2	Proteasome subunit beta. (201 aa)
	PSMB8	Proteasome subunit beta. (276 aa)
	PSME1	Proteasome activator complex subunit 1 isoform X1. (249 aa)
	PSME2	Proteasome activator complex subunit 2 isoform X1. (239 aa)
	PSMB6	Proteasome subunit beta. (239 aa)
	PSMA3	Proteasome subunit alpha type. (255 aa)
	PSMA7	Proteasome subunit alpha type. (248 aa)
	PSMA8	Proteasome subunit alpha type. (250 aa)
	PSMA4	Proteasome subunit alpha type. (261 aa)
	PSMA5	Proteasome subunit alpha type. (235 aa)
	LOC102732367	Proteasome subunit beta type-1-like. (140 aa)

Your Current Organism:

Leptonychotes weddellii

NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102732367	LOC102742178	A0A2U3Z731	A0A2U3XMG0	Proteasome subunit beta type-1-like.	Proteasome subunit alpha type.	0.999
LOC102732367	PSMA3	A0A2U3Z731	A0A2U3YKE9	Proteasome subunit beta type-1-like.	Proteasome subunit alpha type.	0.999
LOC102732367	PSMA4	A0A2U3Z731	A0A2U3YXE5	Proteasome subunit beta type-1-like.	Proteasome subunit alpha type.	0.999
LOC102732367	PSMA5	A0A2U3Z731	A0A2U3Z213	Proteasome subunit beta type-1-like.	Proteasome subunit alpha type.	0.999
LOC102732367	PSMA6	A0A2U3Z731	A0A2U3XLE4	Proteasome subunit beta type-1-like.	Proteasome subunit alpha type.	0.999
LOC102732367	PSMA7	A0A2U3Z731	A0A2U3YLS9	Proteasome subunit beta type-1-like.	Proteasome subunit alpha type.	0.997
LOC102732367	PSMA8	A0A2U3Z731	A0A2U3YPI2	Proteasome subunit beta type-1-like.	Proteasome subunit alpha type.	0.997
LOC102732367	PSMB10	A0A2U3Z731	A0A2U3XF99	Proteasome subunit beta type-1-like.	Proteasome subunit beta.	0.999
LOC102732367	PSMB2	A0A2U3Z731	A0A2U3XMR0	Proteasome subunit beta type-1-like.	Proteasome subunit beta.	0.999
LOC102732367	PSMB4	A0A2U3Z731	A0A2U3XAT0	Proteasome subunit beta type-1-like.	Proteasome subunit beta; Belongs to the peptidase T1B family.	0.999
LOC102732367	PSMB6	A0A2U3Z731	A0A2U3YHJ0	Proteasome subunit beta type-1-like.	Proteasome subunit beta.	0.999
LOC102732367	PSMB8	A0A2U3Z731	A0A2U3Y310	Proteasome subunit beta type-1-like.	Proteasome subunit beta.	0.999
LOC102732367	PSME1	A0A2U3Z731	A0A2U3Y4R5	Proteasome subunit beta type-1-like.	Proteasome activator complex subunit 1 isoform X1.	0.958
LOC102732367	PSME2	A0A2U3Z731	A0A2U3Y4T3	Proteasome subunit beta type-1-like.	Proteasome activator complex subunit 2 isoform X1.	0.944
LOC102742178	LOC102732367	A0A2U3XMG0	A0A2U3Z731	Proteasome subunit alpha type.	Proteasome subunit beta type-1-like.	0.999
LOC102742178	PSMA3	A0A2U3XMG0	A0A2U3YKE9	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
LOC102742178	PSMA4	A0A2U3XMG0	A0A2U3YXE5	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
LOC102742178	PSMA5	A0A2U3XMG0	A0A2U3Z213	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
LOC102742178	PSMA6	A0A2U3XMG0	A0A2U3XLE4	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999
LOC102742178	PSMA7	A0A2U3XMG0	A0A2U3YLS9	Proteasome subunit alpha type.	Proteasome subunit alpha type.	0.999