STRINGSTRING
CRB1 CRB1 HOXA3 HOXA3 FGF10 FGF10 CHD7 CHD7 SEMA3C SEMA3C DBH DBH MEF2C MEF2C ACVRL1 ACVRL1 DLL4 DLL4 NOL3 NOL3 EPAS1 EPAS1 MDM2 MDM2 LOC102729478 LOC102729478 AXL AXL CBS CBS LOC102744509 LOC102744509 LOC102745028 LOC102745028 LOC102741200 LOC102741200 FLNA FLNA ATG5 ATG5 BAK1 BAK1 JAG1 JAG1 BMPR2 BMPR2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CRB1Protein crumbs homolog 1 isoform X1. (1406 aa)
HOXA3Homeobox protein Hox-A3. (440 aa)
FGF10Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (218 aa)
CHD7chromodomain-helicase-DNA-binding protein 7. (2429 aa)
SEMA3Csemaphorin-3C; Belongs to the semaphorin family. (696 aa)
DBHDopamine beta-hydroxylase. (274 aa)
MEF2CMyocyte-specific enhancer factor 2C-like isoform X2. (473 aa)
ACVRL1Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (504 aa)
DLL4Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (685 aa)
NOL3Nucleolar protein 3. (212 aa)
EPAS1Endothelial PAS domain-containing protein 1. (865 aa)
MDM2E3 ubiquitin-protein ligase Mdm2; Belongs to the MDM2/MDM4 family. (487 aa)
LOC102729478Endothelin-1 receptor-like; Belongs to the G-protein coupled receptor 1 family. (253 aa)
AXLTyrosine-protein kinase receptor UFO. (887 aa)
CBSCystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (572 aa)
LOC102744509Autophagy protein 5-like. (78 aa)
LOC102745028Endothelin-1 receptor-like. (178 aa)
LOC102741200Exostosin-1-like; Belongs to the glycosyltransferase 47 family. (746 aa)
FLNAfilamin-A-like. (1685 aa)
ATG5Autophagy protein 5; Involved in autophagic vesicle formation. (255 aa)
BAK1Bcl-2 homologous antagonist/killer. (211 aa)
JAG1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1218 aa)
BMPR2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (974 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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