STRINGSTRING
DTD2 DTD2 TARS2 TARS2 VARS VARS AARSD1 AARSD1 LARS2 LARS2 IARS2 IARS2 VARS2 VARS2 AARS2 AARS2 LOC102732165 LOC102732165 LOC102746877 LOC102746877 LARS LARS DTD1 DTD1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DTD2Probable D-tyrosyl-tRNA(Tyr) deacylase 2. (168 aa)
TARS2threonine--tRNA ligase, mitochondrial. (594 aa)
VARSvaline--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family. (1264 aa)
AARSD1alanyl-tRNA editing protein Aarsd1. (412 aa)
LARS2Probable leucine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (664 aa)
IARS2isoleucine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (1012 aa)
VARS2valine--tRNA ligase, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family. (1062 aa)
AARS2alanine--tRNA ligase, mitochondrial-like; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (882 aa)
LOC102732165threonine--tRNA ligase, mitochondrial-like. (129 aa)
LOC102746877prolyl-tRNA synthetase associated domain-containing protein 1-like isoform X1. (172 aa)
LARSleucine--tRNA ligase, cytoplasmic isoform X1; Belongs to the class-I aminoacyl-tRNA synthetase family. (1178 aa)
DTD1D-aminoacyl-tRNA deacylase. (209 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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