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UBTFL1 UBTFL1 LOC102738379 LOC102738379 TAF9B TAF9B NCOA6 NCOA6 LOC102745331 LOC102745331 CCNH CCNH RRN3 RRN3 DR1 DR1 GCC1 GCC1 POLR1E POLR1E CRCP CRCP PNO1 PNO1 POLR2G POLR2G POLR2I POLR2I TAF7 TAF7 GTF2E2 GTF2E2 GTF2E1 GTF2E1 TAF6 TAF6 SMARCA5 SMARCA5 LOC102726286 LOC102726286 GTF2F2 GTF2F2 TBPL2 TBPL2 TAF11 TAF11 GTF2B GTF2B UBTF UBTF TAF9 TAF9 GTF2H5 GTF2H5 TAF1C TAF1C TAF12 TAF12 POLR3H POLR3H TAF3 TAF3 POLR2D POLR2D BRF2 BRF2 GTF3C4 GTF3C4 TFAM TFAM TAF4 TAF4 TBP TBP GTF2A1L GTF2A1L LOC102747225 LOC102747225 GTF3C1 GTF3C1 TBPL1 TBPL1 ERCC3 ERCC3 LOC102731009 LOC102731009 PIH1D1 PIH1D1 PTRF PTRF LOC102747355 LOC102747355 POLRMT POLRMT
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UBTFL1LOW QUALITY PROTEIN: upstream binding transcription factor, RNA polymerase I-like 1. (300 aa)
LOC102738379rRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (401 aa)
TAF9BTranscription initiation factor TFIID subunit 9B. (250 aa)
NCOA6Nuclear receptor coactivator 6 isoform X1. (2046 aa)
LOC102745331Transcription initiation factor TFIID subunit 8-like. (269 aa)
CCNHcyclin-H-like; Belongs to the cyclin family. (344 aa)
RRN3RNA polymerase I-specific transcription initiation factor RRN3 isoform X1. (651 aa)
DR1Protein Dr1 isoform X1. (175 aa)
GCC1GRIP and coiled-coil domain-containing protein 1. (775 aa)
POLR1EDNA-directed RNA polymerase I subunit RPA49 isoform X1. (419 aa)
CRCPDNA-directed RNA polymerase III subunit RPC9. (147 aa)
PNO1RNA-binding protein PNO1 isoform X1. (252 aa)
POLR2GDNA-directed RNA polymerase II subunit RPB7. (172 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
TAF7Transcription initiation factor TFIID subunit 7. (349 aa)
GTF2E2Transcription initiation factor IIE subunit beta. (240 aa)
GTF2E1General transcription factor IIE subunit 1. (438 aa)
TAF6Transcription initiation factor TFIID subunit 6 isoform X1. (677 aa)
SMARCA5SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5. (1052 aa)
LOC102726286Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (78 aa)
GTF2F2General transcription factor IIF subunit 2. (239 aa)
TBPL2TATA box-binding protein-like protein 2. (344 aa)
TAF11Transcription initiation factor TFIID subunit 11 isoform X1. (211 aa)
GTF2BTranscription initiation factor IIB. (316 aa)
UBTFNucleolar transcription factor 1 isoform X1. (764 aa)
TAF9Transcription initiation factor TFIID subunit 9-like isoform X1. (265 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
TAF1CTATA box-binding protein-associated factor RNA polymerase I subunit C. (849 aa)
TAF12Transcription initiation factor TFIID subunit 12 isoform X1. (161 aa)
POLR3HDNA-directed RNA polymerase III subunit RPC8 isoform X1. (204 aa)
TAF3Transcription initiation factor TFIID subunit 3. (774 aa)
POLR2DDNA-directed RNA polymerase II subunit RPB4. (142 aa)
BRF2Transcription factor IIIB 50 kDa subunit. (421 aa)
GTF3C4General transcription factor 3C polypeptide 4. (772 aa)
TFAMTranscription factor A, mitochondrial isoform X1. (246 aa)
TAF4Transcription initiation factor TFIID subunit 4. (668 aa)
TBPTATA-box-binding protein. (322 aa)
GTF2A1LTFIIA-alpha and beta-like factor isoform X1. (477 aa)
LOC102747225DNA-directed RNA polymerase I subunit RPA43-like. (316 aa)
GTF3C1General transcription factor 3C polypeptide 1 isoform X1. (2113 aa)
TBPL1TATA box-binding protein-like protein 1. (186 aa)
ERCC3TFIIH basal transcription factor complex helicase XPB subunit. (782 aa)
LOC102731009DNA-directed RNA polymerase I subunit RPA43-like. (116 aa)
PIH1D1PIH1 domain-containing protein 1 isoform X1. (347 aa)
PTRFPolymerase I and transcript release factor isoform X1. (390 aa)
LOC102747355Mediator of RNA polymerase II transcription subunit 8; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (268 aa)
POLRMTDNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1228 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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