STRINGSTRING
SCOC SCOC LOC102727300 LOC102727300 LOC102738981 LOC102738981 LOC102733070 LOC102733070 LOC102745333 LOC102745333 LOC102732459 LOC102732459 LOC102741272 LOC102741272 LOC102740077 LOC102740077 LOC102744509 LOC102744509 WDR24 WDR24 LOC102726984 LOC102726984 LOC102746954 LOC102746954 LOC102745624 LOC102745624 SMCR8 SMCR8 LOC102727675 LOC102727675 LOC102749117 LOC102749117 AMBRA1 AMBRA1 SNX30 SNX30 RUFY4 RUFY4 LOC102730087 LOC102730087 TECPR1 TECPR1 NRBP2 NRBP2 LZTS1 LZTS1 RAB3GAP2 RAB3GAP2 SESN3 SESN3 LOC102729166 LOC102729166 PIK3R4 PIK3R4 SUPT5H SUPT5H PIP4K2B PIP4K2B WAC WAC NOD2 NOD2 WIPI1 WIPI1 CALCOCO2 CALCOCO2 VPS13C VPS13C LOC102740301 LOC102740301 PIP4K2C PIP4K2C SESN2 SESN2 ATG5 ATG5 LOC102730047 LOC102730047 SH3GLB1 SH3GLB1 PHF23 PHF23 TP53 TP53 CHMP4A CHMP4A RNF31 RNF31 HIF1A HIF1A EHMT2 EHMT2 WDR45 WDR45 TBC1D25 TBC1D25 PINK1 PINK1 FEZ2 FEZ2 TRIM13 TRIM13 LOC102739096 LOC102739096 QSOX1 QSOX1 NOD1 NOD1 ATG12 ATG12 UBQLN4 UBQLN4 ATG14 ATG14 MTOR MTOR IL4 IL4 TMEM39B TMEM39B NUPR1 NUPR1 LOC102726691 LOC102726691 LOC102730419 LOC102730419 TMEM173 TMEM173 TMEM39A TMEM39A PIK3C3 PIK3C3 SCFD1 SCFD1 SESN1 SESN1 LRRK2 LRRK2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SCOCLOW QUALITY PROTEIN: short coiled-coil protein. (162 aa)
LOC102727300Battenin-like. (109 aa)
LOC102738981Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma-like. (143 aa)
LOC102733070Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma-like. (117 aa)
LOC102745333Serine palmitoyltransferase 2-like. (211 aa)
LOC102732459E3 ubiquitin-protein ligase NRDP1-like. (317 aa)
LOC102741272Protein CLEC16A-like. (284 aa)
LOC102740077Optineurin-like. (123 aa)
LOC102744509Autophagy protein 5-like. (78 aa)
WDR24WD repeat-containing protein 24. (790 aa)
LOC102726984Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha-like. (135 aa)
LOC102746954Fructose-2,6-bisphosphatase TIGAR. (270 aa)
LOC102745624Short coiled-coil protein-like isoform X1. (122 aa)
SMCR8smith-Magenis syndrome chromosomal region candidate gene 8 protein. (937 aa)
LOC102727675Decorin; May affect the rate of fibrils formation. (360 aa)
LOC102749117Sorting nexin. (624 aa)
AMBRA1Activating molecule in BECN1-regulated autophagy protein 1-like. (299 aa)
SNX30Sorting nexin-30. (437 aa)
RUFY4RUN and FYVE domain-containing protein 4-like. (563 aa)
LOC102730087Ceramide synthase 1-like. (99 aa)
TECPR1Tectonin beta-propeller repeat-containing protein 1. (1178 aa)
NRBP2Nuclear receptor-binding protein 2. (499 aa)
LZTS1Leucine zipper putative tumor suppressor 1 isoform X1. (606 aa)
RAB3GAP2Rab3 GTPase-activating protein non-catalytic subunit isoform X1. (1393 aa)
SESN3Sestrin-3 isoform X1. (492 aa)
LOC102729166Phosphatidylinositol 5-phosphate 4-kinase type-2 gamma-like. (134 aa)
PIK3R4Phosphoinositide 3-kinase regulatory subunit 4. (1358 aa)
SUPT5HTranscription elongation factor SPT5. (1087 aa)
PIP4K2BPhosphatidylinositol 5-phosphate 4-kinase type-2 beta. (416 aa)
WACWW domain-containing adapter protein with coiled-coil-like isoform X1. (646 aa)
NOD2Nucleotide-binding oligomerization domain-containing protein 2. (1013 aa)
WIPI1WD repeat domain phosphoinositide-interacting protein 1 isoform X1. (446 aa)
CALCOCO2Calcium-binding and coiled-coil domain-containing protein 2 isoform X2. (449 aa)
VPS13CVacuolar protein sorting-associated protein 13C-like. (3723 aa)
LOC102740301Fasciculation and elongation protein zeta-1-like. (247 aa)
PIP4K2CPhosphatidylinositol 5-phosphate 4-kinase type-2 gamma. (220 aa)
SESN2Sestrin-2. (481 aa)
ATG5Autophagy protein 5; Involved in autophagic vesicle formation. (255 aa)
LOC102730047Tuberin-like. (353 aa)
SH3GLB1endophilin-B1 isoform X1. (393 aa)
PHF23PHD finger protein 23 isoform X1. (403 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (381 aa)
CHMP4ALOW QUALITY PROTEIN: charged multivesicular body protein 4a. (265 aa)
RNF31E3 ubiquitin-protein ligase RNF31 isoform X1. (1080 aa)
HIF1AHypoxia-inducible factor 1-alpha isoform X1. (823 aa)
EHMT2Histone-lysine N-methyltransferase EHMT2 isoform X1. (1268 aa)
WDR45WD repeat domain phosphoinositide-interacting protein 4 isoform X1. (361 aa)
TBC1D25TBC1 domain family member 25 isoform X2. (686 aa)
PINK1Serine/threonine-protein kinase PINK1, mitochondrial. (488 aa)
FEZ2Fasciculation and elongation protein zeta-2. (297 aa)
TRIM13E3 ubiquitin-protein ligase TRIM13. (407 aa)
LOC102739096Protein C9orf72 homolog. (235 aa)
QSOX1Sulfhydryl oxidase. (442 aa)
NOD1Nucleotide-binding oligomerization domain-containing protein 1. (953 aa)
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (140 aa)
UBQLN4Ubiquilin-4. (601 aa)
ATG14Beclin 1-associated autophagy-related key regulator. (492 aa)
MTORSerine/threonine-protein kinase mTOR; Belongs to the PI3/PI4-kinase family. (2550 aa)
IL4Interleukin-4; Participates in at least several B-cell activation processes as well as of other cell types. It is a costimulator of DNA-synthesis. It induces the expression of class II MHC molecules on resting B-cells. It enhances both secretion and cell surface expression of IgE and IgG1. It also regulates the expression of the low affinity Fc receptor for IgE (CD23) on both lymphocytes and monocytes. Belongs to the IL-4/IL-13 family. (131 aa)
TMEM39BTransmembrane protein 39B. (492 aa)
NUPR1Nuclear protein 1 isoform X1. (82 aa)
LOC102726691BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like isoform X2. (194 aa)
LOC102730419Fasciculation and elongation protein zeta-1-like. (104 aa)
TMEM173Stimulator of interferon genes protein. (378 aa)
TMEM39ATransmembrane protein 39A. (488 aa)
PIK3C3Phosphatidylinositol 3-kinase catalytic subunit type 3. (811 aa)
SCFD1Sec1 family domain-containing protein 1 isoform X1; Belongs to the STXBP/unc-18/SEC1 family. (641 aa)
SESN1Sestrin-1 isoform X1. (551 aa)
LRRK2Leucine-rich repeat serine/threonine-protein kinase 2. (2150 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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