STRINGSTRING
CDH9 CDH9 CDH12 CDH12 LOC102725939 LOC102725939 CDH19 CDH19 CDH7 CDH7 LOC102749407 LOC102749407 CTNND1 CTNND1 CDH17 CDH17 CDH8 CDH8 CDH1 CDH1 LOC102726267 LOC102726267 CDH16 CDH16 CDH15 CDH15 CDH13 CDH13 LOC102750159 LOC102750159 LOC102745156 LOC102745156 CTNNA1 CTNNA1 JUP JUP CDH20 CDH20 CDH11 CDH11 CDHR2 CDHR2 LOC102740157 LOC102740157 CDH6 CDH6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CDH9Cadherin-9-like; Cadherins are calcium-dependent cell adhesion proteins. (789 aa)
CDH12Cadherin-12-like isoform X1; Cadherins are calcium-dependent cell adhesion proteins. (794 aa)
LOC102725939Cadherin-18-like; Cadherins are calcium-dependent cell adhesion proteins. (790 aa)
CDH19Cadherin-19 isoform X1; Cadherins are calcium-dependent cell adhesion proteins. (771 aa)
CDH7Cadherin-7; Cadherins are calcium-dependent cell adhesion proteins. (576 aa)
LOC102749407Catenin alpha-2-like. (304 aa)
CTNND1Catenin delta-1 isoform X2. (1022 aa)
CDH17Cadherin-17. (831 aa)
CDH8Cadherin-8-like; Cadherins are calcium-dependent cell adhesion proteins. (621 aa)
CDH1Cadherin-1; Cadherins are calcium-dependent cell adhesion proteins. (879 aa)
LOC102726267Cadherin-20-like. (448 aa)
CDH16Cadherin-16 isoform X1. (829 aa)
CDH15Cadherin-15; Cadherins are calcium-dependent cell adhesion proteins. (169 aa)
CDH13Cadherin-13-like. (512 aa)
LOC102750159Junction plakoglobin-like. (503 aa)
LOC102745156Catenin beta-1-like isoform X1. (216 aa)
CTNNA1Catenin alpha-1 isoform X1. (906 aa)
JUPJunction plakoglobin. (307 aa)
CDH20Cadherin-20-like; Cadherins are calcium-dependent cell adhesion proteins. (297 aa)
CDH11Cadherin-11-like; Cadherins are calcium-dependent cell adhesion proteins. (796 aa)
CDHR2Cadherin-related family member 2. (1308 aa)
LOC102740157Cadherin-5-like; Cadherins are calcium-dependent cell adhesion proteins. (464 aa)
CDH6LOW QUALITY PROTEIN: cadherin-6; Cadherins are calcium-dependent cell adhesion proteins. (747 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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