(20 nodes) Protein hydroxylation network (Leptonychotes weddellii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102737803	UPF0585 protein C16orf13 homolog isoform X1. (204 aa)
	JMJD6	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 isoform X1. (414 aa)
	PLOD2	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform X1. (758 aa)
	LOC102732051	Prolyl 4-hydroxylase subunit alpha-3-like. (196 aa)
	P4HA1	Prolyl 4-hydroxylase subunit alpha-1 isoform X1. (534 aa)
	PLOD3	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3. (741 aa)
	JMJD7	jmjC domain-containing protein 7. (316 aa)
	CRTAP	Cartilage-associated protein. (273 aa)
	LEPREL1	Prolyl 3-hydroxylase 2. (533 aa)
	OGFOD2	2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2. (350 aa)
	EGLN1	Egl nine homolog 1. (128 aa)
	P4HB	Protein disulfide-isomerase. (510 aa)
	FKBP10	Peptidylprolyl isomerase. (582 aa)
	EGLN2	Egl nine homolog 2-like. (405 aa)
	OGFOD1	2-oxoglutarate and iron-dependent oxygenase domain-containing protein 1. (545 aa)
	LOC102748129	Egl nine homolog 3-like. (239 aa)
	VPS33B	Vacuolar protein sorting-associated protein 33B isoform X1; Belongs to the STXBP/unc-18/SEC1 family. (617 aa)
	P4HTM	Transmembrane prolyl 4-hydroxylase. (438 aa)
	LOC102730931	Prolyl 3-hydroxylase 1-like. (349 aa)
	HIF1AN	Hypoxia-inducible factor 1-alpha inhibitor. (349 aa)

Your Current Organism:

Leptonychotes weddellii

NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CRTAP	FKBP10	A0A2U3Y1Z7	A0A2U3YL20	Cartilage-associated protein.	Peptidylprolyl isomerase.	0.625
CRTAP	LEPREL1	A0A2U3Y1Z7	A0A2U3Y9B8	Cartilage-associated protein.	Prolyl 3-hydroxylase 2.	0.746
CRTAP	LOC102730931	A0A2U3Y1Z7	A0A2U3Z3T2	Cartilage-associated protein.	Prolyl 3-hydroxylase 1-like.	0.972
CRTAP	LOC102732051	A0A2U3Y1Z7	A0A2U3XGC7	Cartilage-associated protein.	Prolyl 4-hydroxylase subunit alpha-3-like.	0.483
CRTAP	P4HA1	A0A2U3Y1Z7	A0A2U3XI95	Cartilage-associated protein.	Prolyl 4-hydroxylase subunit alpha-1 isoform X1.	0.463
CRTAP	P4HB	A0A2U3Y1Z7	A0A2U3YHD8	Cartilage-associated protein.	Protein disulfide-isomerase.	0.578
CRTAP	PLOD2	A0A2U3Y1Z7	A0A2U3XA58	Cartilage-associated protein.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform X1.	0.636
CRTAP	PLOD3	A0A2U3Y1Z7	A0A2U3XQU0	Cartilage-associated protein.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.	0.590
EGLN1	EGLN2	A0A2U3YDZ8	A0A2U3YP65	Egl nine homolog 1.	Egl nine homolog 2-like.	0.898
EGLN1	LOC102748129	A0A2U3YDZ8	A0A2U3YY76	Egl nine homolog 1.	Egl nine homolog 3-like.	0.898
EGLN2	EGLN1	A0A2U3YP65	A0A2U3YDZ8	Egl nine homolog 2-like.	Egl nine homolog 1.	0.898
EGLN2	LOC102748129	A0A2U3YP65	A0A2U3YY76	Egl nine homolog 2-like.	Egl nine homolog 3-like.	0.899
FKBP10	CRTAP	A0A2U3YL20	A0A2U3Y1Z7	Peptidylprolyl isomerase.	Cartilage-associated protein.	0.625
FKBP10	LOC102730931	A0A2U3YL20	A0A2U3Z3T2	Peptidylprolyl isomerase.	Prolyl 3-hydroxylase 1-like.	0.574
FKBP10	PLOD2	A0A2U3YL20	A0A2U3XA58	Peptidylprolyl isomerase.	Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 isoform X1.	0.535
LEPREL1	CRTAP	A0A2U3Y9B8	A0A2U3Y1Z7	Prolyl 3-hydroxylase 2.	Cartilage-associated protein.	0.746
LEPREL1	LOC102732051	A0A2U3Y9B8	A0A2U3XGC7	Prolyl 3-hydroxylase 2.	Prolyl 4-hydroxylase subunit alpha-3-like.	0.475
LEPREL1	P4HB	A0A2U3Y9B8	A0A2U3YHD8	Prolyl 3-hydroxylase 2.	Protein disulfide-isomerase.	0.611
LOC102730931	CRTAP	A0A2U3Z3T2	A0A2U3Y1Z7	Prolyl 3-hydroxylase 1-like.	Cartilage-associated protein.	0.972
LOC102730931	FKBP10	A0A2U3Z3T2	A0A2U3YL20	Prolyl 3-hydroxylase 1-like.	Peptidylprolyl isomerase.	0.574