(9 nodes) Telencephalon regionalization network (Leptonychotes weddellii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102735538	Homeobox protein EMX2-like isoform X1. (253 aa)
	EMX1	Homeobox protein EMX1. (295 aa)
	PAX6	Paired box protein Pax-6. (221 aa)
	DMRTA2	Doublesex- and mab-3-related transcription factor A2. (540 aa)
	TRA2B	Transformer-2 protein homolog beta. (288 aa)
	LHX2	LIM/homeobox protein Lhx2-like isoform X1. (406 aa)
	LOC102740547	Bone morphogenetic protein 4-like isoform X1. (409 aa)
	GPR56	G-protein coupled receptor 56 isoform X3; Belongs to the G-protein coupled receptor 2 family. (687 aa)
	BMP2	Bone morphogenetic protein 2-like. (395 aa)

Your Current Organism:

Leptonychotes weddellii

NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BMP2	LOC102740547	A0A2U3Z3S1	A0A2U3Z034	Bone morphogenetic protein 2-like.	Bone morphogenetic protein 4-like isoform X1.	0.898
DMRTA2	LOC102735538	A0A2U3XKS1	A0A2U3YZT9	Doublesex- and mab-3-related transcription factor A2.	Homeobox protein EMX2-like isoform X1.	0.582
EMX1	PAX6	A0A2U3X9A3	A0A2U3XCB4	Homeobox protein EMX1.	Paired box protein Pax-6.	0.466
LOC102735538	DMRTA2	A0A2U3YZT9	A0A2U3XKS1	Homeobox protein EMX2-like isoform X1.	Doublesex- and mab-3-related transcription factor A2.	0.582
LOC102735538	PAX6	A0A2U3YZT9	A0A2U3XCB4	Homeobox protein EMX2-like isoform X1.	Paired box protein Pax-6.	0.456
LOC102740547	BMP2	A0A2U3Z034	A0A2U3Z3S1	Bone morphogenetic protein 4-like isoform X1.	Bone morphogenetic protein 2-like.	0.898
LOC102740547	PAX6	A0A2U3Z034	A0A2U3XCB4	Bone morphogenetic protein 4-like isoform X1.	Paired box protein Pax-6.	0.541
PAX6	EMX1	A0A2U3XCB4	A0A2U3X9A3	Paired box protein Pax-6.	Homeobox protein EMX1.	0.466
PAX6	LOC102735538	A0A2U3XCB4	A0A2U3YZT9	Paired box protein Pax-6.	Homeobox protein EMX2-like isoform X1.	0.456
PAX6	LOC102740547	A0A2U3XCB4	A0A2U3Z034	Paired box protein Pax-6.	Bone morphogenetic protein 4-like isoform X1.	0.541