STRINGSTRING
TPR TPR LOC102751021 LOC102751021 HDAC3 HDAC3 NF1 NF1 FERMT1 FERMT1 LOC102740547 LOC102740547 TGFB1 TGFB1 LOC102736516 LOC102736516 JUP JUP ZNF259 ZNF259 MAVS MAVS EFCAB7 EFCAB7 IFNG IFNG FLNA FLNA CABP1 CABP1 LOC102750159 LOC102750159 PKIG PKIG IPO5 IPO5 ECT2 ECT2 CHP2 CHP2 DMAP1 DMAP1 PTPN22 PTPN22
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TPRNucleoprotein TPR-like isoform X1. (2439 aa)
LOC102751021Phosphatidylinositol 3-kinase regulatory subunit alpha-like isoform X1. (454 aa)
HDAC3Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (428 aa)
NF1Neurofibromin-like. (1269 aa)
FERMT1Fermitin family homolog 1-like. (678 aa)
LOC102740547Bone morphogenetic protein 4-like isoform X1. (409 aa)
TGFB1Transforming growth factor beta-1. (261 aa)
LOC102736516Phosphatidylinositol 3-kinase regulatory subunit alpha-like. (138 aa)
JUPJunction plakoglobin. (307 aa)
ZNF259Zinc finger protein ZPR1. (460 aa)
MAVSLOW QUALITY PROTEIN: mitochondrial antiviral-signaling protein. (522 aa)
EFCAB7EF-hand calcium-binding domain-containing protein 7 isoform X1. (629 aa)
IFNGInterferon gamma; Produced by lymphocytes activated by specific antigens or mitogens. IFN-gamma, in addition to having antiviral activity, has important immunoregulatory functions. It is a potent activator of macrophages, it has antiproliferative effects on transformed cells and it can potentiate the antiviral and antitumor effects of the type I interferons. (166 aa)
FLNAfilamin-A-like. (1685 aa)
CABP1Calcium-binding protein 1. (199 aa)
LOC102750159Junction plakoglobin-like. (503 aa)
PKIGcAMP-dependent protein kinase inhibitor gamma. (75 aa)
IPO5Importin-5 isoform X1. (1097 aa)
ECT2Protein ECT2 isoform X1. (914 aa)
CHP2Calcineurin B homologous protein 2. (196 aa)
DMAP1DNA methyltransferase 1-associated protein 1 isoform X1. (468 aa)
PTPN22Tyrosine-protein phosphatase non-receptor type 22 isoform X1. (805 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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