(30 nodes) Regulation of amine transport network (Leptonychotes weddellii)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	SYT6	Synaptotagmin-6. (370 aa)
	CARTPT	Cocaine- and amphetamine-regulated transcript protein. (116 aa)
	LOC102731247	Vesicular glutamate transporter 3-like. (355 aa)
	KCNA1	Potassium voltage-gated channel subfamily A member 1-like; Belongs to the potassium channel family. (495 aa)
	LOC102737253	Glial cell line-derived neurotrophic factor-like isoform X1. (211 aa)
	SYT5	Synaptotagmin-5 isoform X2. (386 aa)
	LOC102749626	Synaptotagmin-1-like. (303 aa)
	SYT12	Synaptotagmin-12. (419 aa)
	TOR1A	torsin-1A. (272 aa)
	DRD3	D(3) dopamine receptor isoform X1; Belongs to the G-protein coupled receptor 1 family. (400 aa)
	SYT15	Synaptotagmin-15. (417 aa)
	SYT8	LOW QUALITY PROTEIN: synaptotagmin-8. (511 aa)
	SYT3	Synaptotagmin-3. (544 aa)
	LOC102739346	Dysbindin-like. (159 aa)
	SYT13	Synaptotagmin-13. (145 aa)
	LOC102741824	Dysbindin-like. (250 aa)
	SYT17	Synaptotagmin-17. (474 aa)
	SLC43A2	Large neutral amino acids transporter small subunit 4 isoform X1. (575 aa)
	SYT10	Synaptotagmin-10. (523 aa)
	PINK1	Serine/threonine-protein kinase PINK1, mitochondrial. (488 aa)
	LOC102730991	Ras-related protein Rab-3B-like. (219 aa)
	SNCA	Alpha-synuclein; Belongs to the synuclein family. (140 aa)
	ITGB1	Integrin beta; Belongs to the integrin beta chain family. (798 aa)
	P2RX7	P2X purinoceptor; Receptor for ATP that acts as a ligand-gated ion channel. Belongs to the P2X receptor family. (591 aa)
	SYT4	Synaptotagmin-4-like isoform X1. (425 aa)
	ARL6IP5	PRA1 family protein. (188 aa)
	VIP	VIP peptides isoform X1. (170 aa)
	RAB3B	Ras-related protein Rab-3B. (179 aa)
	SLC43A1	LOW QUALITY PROTEIN: large neutral amino acids transporter small subunit 3. (589 aa)
	SYT2	Synaptotagmin-2. (419 aa)

Your Current Organism:

Leptonychotes weddellii

NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102730991	LOC102749626	A0A2U3X6E1	A0A2U3Z0W3	Ras-related protein Rab-3B-like.	Synaptotagmin-1-like.	0.640
LOC102730991	SYT2	A0A2U3X6E1	A0A2U3Y7L5	Ras-related protein Rab-3B-like.	Synaptotagmin-2.	0.640
LOC102730991	SYT4	A0A2U3X6E1	A0A2U3XYU8	Ras-related protein Rab-3B-like.	Synaptotagmin-4-like isoform X1.	0.580
LOC102731247	LOC102749626	A0A2U3Z6F1	A0A2U3Z0W3	Vesicular glutamate transporter 3-like.	Synaptotagmin-1-like.	0.512
LOC102731247	SYT2	A0A2U3Z6F1	A0A2U3Y7L5	Vesicular glutamate transporter 3-like.	Synaptotagmin-2.	0.512
LOC102739346	LOC102741824	A0A2U3YWL8	A0A2U3YMM2	Dysbindin-like.	Dysbindin-like.	0.900
LOC102741824	LOC102739346	A0A2U3YMM2	A0A2U3YWL8	Dysbindin-like.	Dysbindin-like.	0.900
LOC102749626	LOC102730991	A0A2U3Z0W3	A0A2U3X6E1	Synaptotagmin-1-like.	Ras-related protein Rab-3B-like.	0.640
LOC102749626	LOC102731247	A0A2U3Z0W3	A0A2U3Z6F1	Synaptotagmin-1-like.	Vesicular glutamate transporter 3-like.	0.512
LOC102749626	RAB3B	A0A2U3Z0W3	A0A2U3XKY1	Synaptotagmin-1-like.	Ras-related protein Rab-3B.	0.640
LOC102749626	SYT4	A0A2U3Z0W3	A0A2U3XYU8	Synaptotagmin-1-like.	Synaptotagmin-4-like isoform X1.	0.745
LOC102749626	SYT8	A0A2U3Z0W3	A0A2U3YXC7	Synaptotagmin-1-like.	LOW QUALITY PROTEIN: synaptotagmin-8.	0.496
PINK1	SNCA	A0A2U3Y3N8	A0A2U3X6K7	Serine/threonine-protein kinase PINK1, mitochondrial.	Alpha-synuclein; Belongs to the synuclein family.	0.778
RAB3B	LOC102749626	A0A2U3XKY1	A0A2U3Z0W3	Ras-related protein Rab-3B.	Synaptotagmin-1-like.	0.640
RAB3B	SYT2	A0A2U3XKY1	A0A2U3Y7L5	Ras-related protein Rab-3B.	Synaptotagmin-2.	0.640
RAB3B	SYT4	A0A2U3XKY1	A0A2U3XYU8	Ras-related protein Rab-3B.	Synaptotagmin-4-like isoform X1.	0.580
SNCA	PINK1	A0A2U3X6K7	A0A2U3Y3N8	Alpha-synuclein; Belongs to the synuclein family.	Serine/threonine-protein kinase PINK1, mitochondrial.	0.778
SYT10	SYT3	A0A2U3X8E8	A0A2U3YWN2	Synaptotagmin-10.	Synaptotagmin-3.	0.544
SYT10	SYT6	A0A2U3X8E8	A0A2U3XAM7	Synaptotagmin-10.	Synaptotagmin-6.	0.544
SYT2	LOC102730991	A0A2U3Y7L5	A0A2U3X6E1	Synaptotagmin-2.	Ras-related protein Rab-3B-like.	0.640