STRINGSTRING
DEDD DEDD LOC102730307 LOC102730307 LOC102733534 LOC102733534 VDR VDR JUNB JUNB GHSR GHSR BMPR2 BMPR2 ASH1L ASH1L GHRL GHRL PRDM1 PRDM1 LOC102746290 LOC102746290 CITED2 CITED2 STOX2 STOX2 NODAL NODAL MED1 MED1 CBS CBS
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
DEDDDeath effector domain-containing protein isoform X1. (318 aa)
LOC102730307CUB and sushi domain-containing protein 1-like. (828 aa)
LOC102733534Protein LDOC1-like. (149 aa)
VDRVitamin D3 receptor. (427 aa)
JUNBTranscription factor jun-B. (347 aa)
GHSRGrowth hormone secretagogue receptor type 1; Belongs to the G-protein coupled receptor 1 family. (366 aa)
BMPR2Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (974 aa)
ASH1LHistone-lysine N-methyltransferase ASH1L. (2965 aa)
GHRLAppetite-regulating hormone isoform X1. (117 aa)
PRDM1PR domain zinc finger protein 1 isoform X3. (818 aa)
LOC10274629025-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial-like; Belongs to the cytochrome P450 family. (508 aa)
CITED2Cbp/p300-interacting transactivator 2. (271 aa)
STOX2Storkhead-box protein 2. (760 aa)
NODALNodal homolog. (348 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1582 aa)
CBSCystathionine beta-synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (572 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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