STRINGSTRING
LOC102749983 LOC102749983 AP3S2 AP3S2 LOC102750571 LOC102750571 LOC102749699 LOC102749699 MAP1B MAP1B LOC102739346 LOC102739346 SNAPIN SNAPIN LOC102730094 LOC102730094 RAB1A RAB1A TRAK2 TRAK2 BICD2 BICD2 PEX14 PEX14 TSGA13 TSGA13 NDE1 NDE1 SYBU SYBU AP3B1 AP3B1 LOC102741824 LOC102741824 MEF2BNB MEF2BNB ACTR10 ACTR10 BLOC1S4 BLOC1S4 CCDC64B CCDC64B RASGRP1 RASGRP1 COPG1 COPG1 PAFAH1B1 PAFAH1B1 LOC102726005 LOC102726005 LOC102745784 LOC102745784 HIF1A HIF1A LOC102746856 LOC102746856 LOC102745641 LOC102745641 LOC102727300 LOC102727300 MGARP MGARP ARMCX3 ARMCX3 SUN1 SUN1 LOC102746878 LOC102746878 MREG MREG TRIM46 TRIM46 AP3M1 AP3M1 LOH12CR1 LOH12CR1 AGBL4 AGBL4 SPAST SPAST LOC102736746 LOC102736746 NEFL NEFL CCDC64 CCDC64 LOC102736866 LOC102736866
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102749983F-box/WD repeat-containing protein 11-like. (264 aa)
AP3S2AP-3 complex subunit sigma-2. (193 aa)
LOC102750571Peroxisomal membrane protein PEX14-like. (239 aa)
LOC102749699Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. May play a role in intracellular vesicle trafficking, particular [...] (172 aa)
MAP1BMicrotubule-associated protein 1B-like isoform X1. (2348 aa)
LOC102739346Dysbindin-like. (159 aa)
SNAPINSNARE-associated protein Snapin. (137 aa)
LOC102730094Trafficking kinesin-binding protein 2-like. (256 aa)
RAB1ARas-related protein Rab-1A isoform X1. (205 aa)
TRAK2Trafficking kinesin-binding protein 2-like. (647 aa)
BICD2Protein bicaudal D homolog 2. (720 aa)
PEX14Peroxisomal membrane protein PEX14. (99 aa)
TSGA13Testis-specific gene 13 protein. (272 aa)
NDE1Nuclear distribution protein nudE homolog 1. (346 aa)
SYBUSyntabulin isoform X1. (694 aa)
AP3B1AP-3 complex subunit beta; Belongs to the adaptor complexes large subunit family. (1092 aa)
LOC102741824Dysbindin-like. (250 aa)
MEF2BNBProtein MEF2BNB. (119 aa)
ACTR10Actin-related protein 10; Belongs to the actin family. (417 aa)
BLOC1S4Biogenesis of lysosome-related organelles complex 1 subunit 4. (218 aa)
CCDC64BBicaudal D-related protein 2. (505 aa)
RASGRP1RAS guanyl-releasing protein 1-like isoform X1. (366 aa)
COPG1Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin- coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. (874 aa)
PAFAH1B1Platelet-activating factor acetylhydrolase IB subunit alpha. (148 aa)
LOC102726005UPF0693 protein C10orf32 homolog. (105 aa)
LOC102745784Mitochondrial Rho GTPase 1-like. (495 aa)
HIF1AHypoxia-inducible factor 1-alpha isoform X1. (823 aa)
LOC102746856Platelet-activating factor acetylhydrolase IB subunit alpha-like isoform X1. (239 aa)
LOC102745641Coatomer subunit gamma-2-like. (147 aa)
LOC102727300Battenin-like. (109 aa)
MGARPLOW QUALITY PROTEIN: protein MGARP. (241 aa)
ARMCX3Armadillo repeat-containing X-linked protein 3 isoform X1. (379 aa)
SUN1SUN domain-containing protein 1. (471 aa)
LOC102746878Cytoplasmic dynein 1 intermediate chain 1-like. (158 aa)
MREGMelanoregulin. (214 aa)
TRIM46Tripartite motif-containing protein 46 isoform X1. (800 aa)
AP3M1AP-3 complex subunit mu-1 isoform X1; Belongs to the adaptor complexes medium subunit family. (418 aa)
LOH12CR1Loss of heterozygosity 12 chromosomal region 1 protein isoform X1. (196 aa)
AGBL4Cytosolic carboxypeptidase 6. (204 aa)
SPASTSpastin; ATP-dependent microtubule severing protein that specifically recognizes and cuts microtubules that are polyglutamylated. Preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Severing activity is not dependent on tubulin acetylation or detyrosination. Microtubule severing promotes reorganization of cellular microtubule arrays and the release of microtubules from the centrosome following nucleation [...] (616 aa)
LOC102736746Cytoplasmic dynein 1 intermediate chain 1-like. (396 aa)
NEFLNeurofilament light polypeptide; Belongs to the intermediate filament family. (545 aa)
CCDC64Bicaudal D-related protein 1. (270 aa)
LOC102736866Cytoplasmic dynein 1 heavy chain 1-like. (856 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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