11 items (Leptonychotes weddellii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	DR1	Protein Dr1 isoform X1. (175 aa)
	EP300	Histone acetyltransferase p300. (2425 aa)
	PRKAA1	Non-specific serine/threonine protein kinase. (559 aa)
	FNTA	Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha. (379 aa)
	BEX4	Protein BEX4. (120 aa)
	KAT2A	Histone acetyltransferase KAT2A isoform X2. (838 aa)
	TADA3	Transcriptional adapter 3 isoform X1. (432 aa)
	MBIP	MAP3K12-binding inhibitory protein 1 isoform X1. (344 aa)
	TPPP	Tubulin polymerization-promoting protein. (221 aa)
	LOC102729806	WD repeat-containing protein 5-like. (334 aa)
	TADA2A	LOW QUALITY PROTEIN: transcriptional adaptor 2A. (306 aa)

Your Current Organism:

Leptonychotes weddellii

NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR1	KAT2A	A0A2U3XBU0	A0A2U3Y4H3	Protein Dr1 isoform X1.	Histone acetyltransferase KAT2A isoform X2.	0.593
DR1	LOC102729806	A0A2U3XBU0	A0A2U3Z0A5	Protein Dr1 isoform X1.	WD repeat-containing protein 5-like.	0.687
DR1	MBIP	A0A2U3XBU0	A0A2U3YB75	Protein Dr1 isoform X1.	MAP3K12-binding inhibitory protein 1 isoform X1.	0.846
DR1	TADA2A	A0A2U3XBU0	A0A2U3Z920	Protein Dr1 isoform X1.	LOW QUALITY PROTEIN: transcriptional adaptor 2A.	0.892
DR1	TADA3	A0A2U3XBU0	A0A2U3Y5R5	Protein Dr1 isoform X1.	Transcriptional adapter 3 isoform X1.	0.844
EP300	KAT2A	A0A2U3XF65	A0A2U3Y4H3	Histone acetyltransferase p300.	Histone acetyltransferase KAT2A isoform X2.	0.985
EP300	LOC102729806	A0A2U3XF65	A0A2U3Z0A5	Histone acetyltransferase p300.	WD repeat-containing protein 5-like.	0.582
KAT2A	DR1	A0A2U3Y4H3	A0A2U3XBU0	Histone acetyltransferase KAT2A isoform X2.	Protein Dr1 isoform X1.	0.593
KAT2A	EP300	A0A2U3Y4H3	A0A2U3XF65	Histone acetyltransferase KAT2A isoform X2.	Histone acetyltransferase p300.	0.985
KAT2A	LOC102729806	A0A2U3Y4H3	A0A2U3Z0A5	Histone acetyltransferase KAT2A isoform X2.	WD repeat-containing protein 5-like.	0.903
KAT2A	MBIP	A0A2U3Y4H3	A0A2U3YB75	Histone acetyltransferase KAT2A isoform X2.	MAP3K12-binding inhibitory protein 1 isoform X1.	0.484
KAT2A	TADA2A	A0A2U3Y4H3	A0A2U3Z920	Histone acetyltransferase KAT2A isoform X2.	LOW QUALITY PROTEIN: transcriptional adaptor 2A.	0.942
KAT2A	TADA3	A0A2U3Y4H3	A0A2U3Y5R5	Histone acetyltransferase KAT2A isoform X2.	Transcriptional adapter 3 isoform X1.	0.996
LOC102729806	DR1	A0A2U3Z0A5	A0A2U3XBU0	WD repeat-containing protein 5-like.	Protein Dr1 isoform X1.	0.687
LOC102729806	EP300	A0A2U3Z0A5	A0A2U3XF65	WD repeat-containing protein 5-like.	Histone acetyltransferase p300.	0.582
LOC102729806	KAT2A	A0A2U3Z0A5	A0A2U3Y4H3	WD repeat-containing protein 5-like.	Histone acetyltransferase KAT2A isoform X2.	0.903
LOC102729806	MBIP	A0A2U3Z0A5	A0A2U3YB75	WD repeat-containing protein 5-like.	MAP3K12-binding inhibitory protein 1 isoform X1.	0.620
LOC102729806	TADA2A	A0A2U3Z0A5	A0A2U3Z920	WD repeat-containing protein 5-like.	LOW QUALITY PROTEIN: transcriptional adaptor 2A.	0.581
LOC102729806	TADA3	A0A2U3Z0A5	A0A2U3Y5R5	WD repeat-containing protein 5-like.	Transcriptional adapter 3 isoform X1.	0.687
MBIP	DR1	A0A2U3YB75	A0A2U3XBU0	MAP3K12-binding inhibitory protein 1 isoform X1.	Protein Dr1 isoform X1.	0.846