STRINGSTRING
SIX2 SIX2 AGT AGT LOC102737253 LOC102737253 WNT2B WNT2B LOC102740547 LOC102740547 LOC102727345 LOC102727345 TACSTD2 TACSTD2 SOX8 SOX8 LGR4 LGR4 HOXB7 HOXB7 LHX1 LHX1 GREM1 GREM1 SIX4 SIX4 SIX1 SIX1 NOG NOG
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SIX2Homeobox protein SIX2. (294 aa)
AGTAngiotensinogen; Belongs to the serpin family. (477 aa)
LOC102737253Glial cell line-derived neurotrophic factor-like isoform X1. (211 aa)
WNT2BProtein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (393 aa)
LOC102740547Bone morphogenetic protein 4-like isoform X1. (409 aa)
LOC102727345Transcription factor SOX-9-like. (282 aa)
TACSTD2Tumor-associated calcium signal transducer 2. (323 aa)
SOX8Transcription factor SOX-8. (412 aa)
LGR4Leucine-rich repeat-containing G-protein coupled receptor 4. (951 aa)
HOXB7Homeobox protein Hox-B7. (83 aa)
LHX1LIM/homeobox protein Lhx1. (406 aa)
GREM1Gremlin. (184 aa)
SIX4Homeobox protein SIX4. (778 aa)
SIX1Homeobox protein SIX1. (284 aa)
NOGNoggin; Inhibitor of bone morphogenetic proteins (BMP) signaling which is required for growth and patterning of the neural tube and somite. (232 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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