STRINGSTRING
WNT16 WNT16 BRCA2 BRCA2 SMC5 SMC5 HMGA2 HMGA2 SMC6 SMC6 ZMIZ1 ZMIZ1 SRF SRF TP53 TP53 TBX3 TBX3 PML PML NUP62 NUP62 HMGA1 HMGA1 LOC102748904 LOC102748904 ABL1 ABL1 CITED2 CITED2 CDKN1A CDKN1A LMNA LMNA LOC102726484 LOC102726484 LOC102733867 LOC102733867
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
WNT16Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (149 aa)
BRCA2Breast cancer type 2 susceptibility protein homolog. (2818 aa)
SMC5Structural maintenance of chromosomes protein 5-like isoform X2. (1091 aa)
HMGA2High mobility group protein HMGI-C. (109 aa)
SMC6Structural maintenance of chromosomes protein 6. (1097 aa)
ZMIZ1Zinc finger MIZ domain-containing protein 1. (957 aa)
SRFSerum response factor. (508 aa)
TP53Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (381 aa)
TBX3T-box transcription factor TBX3. (675 aa)
PMLProtein PML. (880 aa)
NUP62Nuclear pore glycoprotein p62. (525 aa)
HMGA1High mobility group protein HMG-I/HMG-Y isoform X1. (107 aa)
LOC102748904Augurin. (147 aa)
ABL1Tyrosine-protein kinase ABL1-like. (312 aa)
CITED2Cbp/p300-interacting transactivator 2. (271 aa)
CDKN1ACyclin-dependent kinase inhibitor 1 isoform X1. (161 aa)
LMNAprelamin-A/C isoform X1; Belongs to the intermediate filament family. (666 aa)
LOC102726484Protein Wnt; Ligand for members of the frizzled family of seven transmembrane receptors; Belongs to the Wnt family. (207 aa)
LOC102733867Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. (235 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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