STRINGSTRING
SPARCL1 SPARCL1 LRFN5 LRFN5 PCDH17 PCDH17 SLITRK3 SLITRK3 NLGN1 NLGN1 LRRC4C LRRC4C LOC102728392 LOC102728392 FLRT3 FLRT3 GPC4 GPC4 PTPRF PTPRF LOC102742901 LOC102742901 LRRC4 LRRC4 LRRC4B LRRC4B LRFN4 LRFN4 LOC102733273 LOC102733273 SLITRK1 SLITRK1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SPARCL1SPARC-like protein 1. (666 aa)
LRFN5Leucine-rich repeat and fibronectin type-III domain-containing protein 5-like. (719 aa)
PCDH17Protocadherin-17-like. (1162 aa)
SLITRK3SLIT and NTRK-like protein 3 isoform X1. (979 aa)
NLGN1Neuroligin-1-like. (619 aa)
LRRC4CLeucine-rich repeat-containing protein 4C-like isoform X3. (640 aa)
LOC102728392ephrin-A5-like; Belongs to the ephrin family. (191 aa)
FLRT3Leucine-rich repeat transmembrane protein FLRT3 isoform X1. (649 aa)
GPC4Glypican-4; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (283 aa)
PTPRFReceptor-type tyrosine-protein phosphatase F. (687 aa)
LOC102742901Glypican-6-like; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (267 aa)
LRRC4Leucine-rich repeat-containing protein 4-like. (650 aa)
LRRC4BLeucine-rich repeat-containing protein 4B. (646 aa)
LRFN4Leucine-rich repeat and fibronectin type-III domain-containing protein 4 isoform X1. (636 aa)
LOC102733273Glypican-4-like; Cell surface proteoglycan that bears heparan sulfate. Belongs to the glypican family. (222 aa)
SLITRK1SLIT and NTRK-like protein 1. (696 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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