STRINGSTRING
LRRC1 LRRC1 CACNG5 CACNG5 CACNG4 CACNG4 RAB11B RAB11B LOC102737793 LOC102737793 LOC102737493 LOC102737493 CACNG7 CACNG7 GRIPAP1 GRIPAP1 LOC102731583 LOC102731583 GRIP2 GRIP2 CACNG2 CACNG2 LOC102738442 LOC102738442 STX3 STX3 LOC102745732 LOC102745732 VPS35 VPS35 LOC102744202 LOC102744202
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LRRC1Leucine-rich repeat-containing protein 1. (242 aa)
CACNG5Voltage-dependent calcium channel gamma-5 subunit. (275 aa)
CACNG4Voltage-dependent calcium channel gamma-4 subunit; Regulates the activity of L-type calcium channels that contain CACNA1C as pore-forming subunit (By similarity). Regulates the trafficking and gating properties of AMPA-selective glutamate receptors (AMPARs), including GRIA1 and GRIA4. Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization and by mediating their resensitization; Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily. (327 aa)
RAB11BRas-related protein Rab-11B. (218 aa)
LOC102737793Ras-related protein Rab-8A-like. (207 aa)
LOC102737493Synaptosomal-associated protein; Belongs to the SNAP-25 family. (143 aa)
CACNG7Voltage-dependent calcium channel gamma-7 subunit; Regulates the activity of L-type calcium channels that contain CACNA1C as pore-forming subunit (By similarity). Regulates the trafficking and gating properties of AMPA-selective glutamate receptors (AMPARs). Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization and by mediating their resensitization. Shows specificity only for GRIA1 and GRIA2. Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily. (275 aa)
GRIPAP1GRIP1-associated protein 1. (841 aa)
LOC102731583Voltage-dependent calcium channel gamma-3 subunit-like. (315 aa)
GRIP2Glutamate receptor-interacting protein 2. (919 aa)
CACNG2Voltage-dependent calcium channel gamma-2 subunit; Regulates the trafficking and gating properties of AMPA- selective glutamate receptors (AMPARs). Promotes their targeting to the cell membrane and synapses and modulates their gating properties by slowing their rates of activation, deactivation and desensitization. Does not show subunit-specific AMPA receptor regulation and regulates all AMPAR subunits. Thought to stabilize the calcium channel in an inactivated (closed) state; Belongs to the PMP-22/EMP/MP20 family. CACNG subfamily. (252 aa)
LOC102738442Neuron-specific protein family member 1-like. (186 aa)
STX3Syntaxin-3; Belongs to the syntaxin family. (285 aa)
LOC102745732Leucine-rich repeat-containing protein 1-like. (92 aa)
VPS35Vacuolar protein sorting-associated protein 35. (509 aa)
LOC102744202Rho GTPase-activating protein 44-like. (155 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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