STRINGSTRING
SOX5 SOX5 KDM3A KDM3A LOC102737270 LOC102737270 STAT3 STAT3 HNRNPU HNRNPU LOC102742062 LOC102742062 FGF2 FGF2 SMYD5 SMYD5 LOC102730920 LOC102730920 LOC102735433 LOC102735433 ABL1 ABL1 YAP1 YAP1 NUDT21 NUDT21 PDGFRA PDGFRA CDK12 CDK12 NFE2L2 NFE2L2 LOC102727345 LOC102727345 ZFP36 ZFP36 LOC102745380 LOC102745380 ZFP36L2 ZFP36L2 GSK3B GSK3B SOX17 SOX17 DHX36 DHX36 SP7 SP7 LTBP3 LTBP3 HSPA9 HSPA9 TACSTD2 TACSTD2 TBX3 TBX3 HOXB4 HOXB4 LOC102745161 LOC102745161 NANOG NANOG TGFB2 TGFB2 SETD1A SETD1A EIF2AK2 EIF2AK2 JAG1 JAG1 GATA6 GATA6 LOC102737670 LOC102737670 SLC4A11 SLC4A11 EZH2 EZH2 LOC102739262 LOC102739262 LOC102730695 LOC102730695
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SOX5Transcription factor SOX-5 isoform X2. (763 aa)
KDM3ALysine-specific demethylase 3A-like. (281 aa)
LOC102737270Negative elongation factor B-like. (199 aa)
STAT3Signal transducer and activator of transcription 3-like. (424 aa)
HNRNPUHeterogeneous nuclear ribonucleoprotein U isoform X1. (825 aa)
LOC102742062T-box transcription factor TBX5-like. (308 aa)
FGF2Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (113 aa)
SMYD5SET and MYND domain-containing protein 5. (418 aa)
LOC102730920Periodic tryptophan protein 1 homolog. (166 aa)
LOC102735433Mitochondrial carrier homolog 2-like; Belongs to the mitochondrial carrier (TC 2.A.29) family. (279 aa)
ABL1Tyrosine-protein kinase ABL1-like. (312 aa)
YAP1Yorkie homolog. (326 aa)
NUDT21Cleavage and polyadenylation specificity factor subunit 5. (161 aa)
PDGFRAPlatelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development. (1090 aa)
CDK12Cyclin-dependent kinase 12 isoform X1. (1491 aa)
NFE2L2Nuclear factor erythroid 2-related factor 2 isoform X1. (590 aa)
LOC102727345Transcription factor SOX-9-like. (282 aa)
ZFP36Tristetraprolin. (325 aa)
LOC102745380Histone-lysine N-methyltransferase EZH2-like. (556 aa)
ZFP36L2Zinc finger protein 36, C3H1 type-like 2-like. (491 aa)
GSK3BGlycogen synthase kinase-3 beta isoform X1; Belongs to the protein kinase superfamily. (433 aa)
SOX17Transcription factor SOX-17-like. (406 aa)
DHX36Probable ATP-dependent RNA helicase DHX36 isoform X1. (1011 aa)
SP7Transcription factor Sp7 isoform X1. (431 aa)
LTBP3Latent-transforming growth factor beta-binding protein 3-like. (1159 aa)
HSPA9Stress-70 protein, mitochondrial; Belongs to the heat shock protein 70 family. (679 aa)
TACSTD2Tumor-associated calcium signal transducer 2. (323 aa)
TBX3T-box transcription factor TBX3. (675 aa)
HOXB4Homeobox protein Hox-B4. (107 aa)
LOC102745161Signal transducer and activator of transcription 3-like. (301 aa)
NANOGHomeobox protein NANOG. (226 aa)
TGFB2Transforming growth factor beta; Belongs to the TGF-beta family. (442 aa)
SETD1AHistone-lysine N-methyltransferase SETD1A-like. (1384 aa)
EIF2AK2Interferon-induced, double-stranded RNA-activated protein kinase. (541 aa)
JAG1Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1218 aa)
GATA6Transcription factor GATA-6. (287 aa)
LOC102737670Cyclin-dependent kinase 6-like. (322 aa)
SLC4A11Sodium bicarbonate transporter-like protein 11. (875 aa)
EZH2Histone-lysine N-methyltransferase EZH2. (144 aa)
LOC102739262Histone-lysine N-methyltransferase SETD1A-like. (299 aa)
LOC102730695Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (227 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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