4 items (Leptonychotes weddellii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PPP1R3B	Protein phosphatase 1 regulatory subunit. (285 aa)
	PPP1R3G	Protein phosphatase 1 regulatory subunit 3G. (351 aa)
	PPP1R3C	Protein phosphatase 1 regulatory subunit 3C; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown. (317 aa)
	PPP1R3A	Protein phosphatase 1 regulatory subunit 3A. (1122 aa)

Your Current Organism:

Leptonychotes weddellii

NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PPP1R3A	PPP1R3B	A0A2U3XE24	A0A2U3YDL9	Protein phosphatase 1 regulatory subunit 3A.	Protein phosphatase 1 regulatory subunit.	0.918
PPP1R3A	PPP1R3C	A0A2U3XE24	A0A2U3Z4D3	Protein phosphatase 1 regulatory subunit 3A.	Protein phosphatase 1 regulatory subunit 3C; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown.	0.883
PPP1R3A	PPP1R3G	A0A2U3XE24	A0A2U3Y9Y4	Protein phosphatase 1 regulatory subunit 3A.	Protein phosphatase 1 regulatory subunit 3G.	0.732
PPP1R3B	PPP1R3A	A0A2U3YDL9	A0A2U3XE24	Protein phosphatase 1 regulatory subunit.	Protein phosphatase 1 regulatory subunit 3A.	0.918
PPP1R3B	PPP1R3C	A0A2U3YDL9	A0A2U3Z4D3	Protein phosphatase 1 regulatory subunit.	Protein phosphatase 1 regulatory subunit 3C; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown.	0.871
PPP1R3B	PPP1R3G	A0A2U3YDL9	A0A2U3Y9Y4	Protein phosphatase 1 regulatory subunit.	Protein phosphatase 1 regulatory subunit 3G.	0.539
PPP1R3C	PPP1R3A	A0A2U3Z4D3	A0A2U3XE24	Protein phosphatase 1 regulatory subunit 3C; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown.	Protein phosphatase 1 regulatory subunit 3A.	0.883
PPP1R3C	PPP1R3B	A0A2U3Z4D3	A0A2U3YDL9	Protein phosphatase 1 regulatory subunit 3C; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown.	Protein phosphatase 1 regulatory subunit.	0.871
PPP1R3C	PPP1R3G	A0A2U3Z4D3	A0A2U3Y9Y4	Protein phosphatase 1 regulatory subunit 3C; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown.	Protein phosphatase 1 regulatory subunit 3G.	0.630
PPP1R3G	PPP1R3A	A0A2U3Y9Y4	A0A2U3XE24	Protein phosphatase 1 regulatory subunit 3G.	Protein phosphatase 1 regulatory subunit 3A.	0.732
PPP1R3G	PPP1R3B	A0A2U3Y9Y4	A0A2U3YDL9	Protein phosphatase 1 regulatory subunit 3G.	Protein phosphatase 1 regulatory subunit.	0.539
PPP1R3G	PPP1R3C	A0A2U3Y9Y4	A0A2U3Z4D3	Protein phosphatase 1 regulatory subunit 3G.	Protein phosphatase 1 regulatory subunit 3C; Acts as a glycogen-targeting subunit for PP1 and regulates its activity. Activates glycogen synthase, reduces glycogen phosphorylase activity and limits glycogen breakdown.	0.630