STRINGSTRING
TAF11 TAF11 PEX2 PEX2 CCNH CCNH RECQL5 RECQL5 RPRD2 RPRD2 TROVE2 TROVE2 CDC73 CDC73 CTR9 CTR9 SH3BP5L SH3BP5L POLR2G POLR2G POLR3C POLR3C MNAT1 MNAT1 POLR1E POLR1E POLRMT POLRMT PDCD1 PDCD1 POLR3K POLR3K LOC102748034 LOC102748034 LOC102746660 LOC102746660 LOC102733739 LOC102733739 RPRD1B RPRD1B LOC102746545 LOC102746545 POLR1C POLR1C ZNRD1 ZNRD1 POLR2C POLR2C POLR2F POLR2F LOC102731009 LOC102731009 POLR3D POLR3D ERCC3 ERCC3 GTF2H1 GTF2H1 LOC102747225 LOC102747225 DHX57 DHX57 LOC102741823 LOC102741823 GTF2A1L GTF2A1L TAF4 TAF4 POLR2M POLR2M PAF1 PAF1 TCEA1 TCEA1 TAF13 TAF13 POLR2L POLR2L RPRD1A RPRD1A POLR2D POLR2D TAF3 TAF3 POLR2E POLR2E GTF2H3 GTF2H3 POLR3H POLR3H TAF5L TAF5L POLR2K POLR2K TAF12 TAF12 GTF2H5 GTF2H5 POLR2A POLR2A GTF2H2 GTF2H2 CD3EAP CD3EAP POLR2H POLR2H POLR1A POLR1A LOC102742396 LOC102742396 POLA2 POLA2 GTF2F2 GTF2F2 SUPT3H SUPT3H LOC102726582 LOC102726582 LOC102725801 LOC102725801 LEO1 LEO1 GTF2E1 GTF2E1 GTF2E2 GTF2E2 TAF7 TAF7 POLR2I POLR2I LAP3 LAP3 POLR2B POLR2B POLR3G POLR3G POLR3E POLR3E POLA1 POLA1 POLR3F POLR3F LOC102745331 LOC102745331 LOC102741776 LOC102741776 LOC102746675 LOC102746675 LOC102741471 LOC102741471
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TAF11Transcription initiation factor TFIID subunit 11 isoform X1. (211 aa)
PEX2Peroxisome biogenesis factor 2 isoform X1. (305 aa)
CCNHcyclin-H-like; Belongs to the cyclin family. (344 aa)
RECQL5ATP-dependent DNA helicase Q5. (408 aa)
RPRD2Regulation of nuclear pre-mRNA domain-containing protein 2. (1069 aa)
TROVE260 kDa SS-A/Ro ribonucleoprotein. (538 aa)
CDC73Parafibromin. (418 aa)
CTR9RNA polymerase-associated protein CTR9 homolog. (723 aa)
SH3BP5LSH3 domain-binding protein 5-like. (385 aa)
POLR2GDNA-directed RNA polymerase II subunit RPB7. (172 aa)
POLR3CRNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (508 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
POLR1EDNA-directed RNA polymerase I subunit RPA49 isoform X1. (419 aa)
POLRMTDNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family. (1228 aa)
PDCD1Programmed cell death protein 1. (266 aa)
POLR3KDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (108 aa)
LOC102748034DNA-directed RNA polymerase III subunit RPC2-like; Belongs to the RNA polymerase beta chain family. (527 aa)
LOC102746660RNA polymerase-associated protein CTR9 homolog. (452 aa)
LOC102733739DNA-directed RNA polymerase II subunit RPB3-like. (189 aa)
RPRD1BRegulation of nuclear pre-mRNA domain-containing protein 1B. (225 aa)
LOC102746545DNA-directed RNA polymerases I and III subunit RPAC2-like. (133 aa)
POLR1CDNA-directed RNA polymerases I and III subunit RPAC1. (346 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
POLR2CDNA-directed RNA polymerase II subunit RPB3. (98 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (127 aa)
LOC102731009DNA-directed RNA polymerase I subunit RPA43-like. (116 aa)
POLR3DDNA-directed RNA polymerase III subunit RPC4 isoform X1. (398 aa)
ERCC3TFIIH basal transcription factor complex helicase XPB subunit. (782 aa)
GTF2H1General transcription factor IIH subunit 1. (441 aa)
LOC102747225DNA-directed RNA polymerase I subunit RPA43-like. (316 aa)
DHX57Putative ATP-dependent RNA helicase DHX57. (1379 aa)
LOC102741823DNA-directed RNA polymerase I subunit RPA2-like. (293 aa)
GTF2A1LTFIIA-alpha and beta-like factor isoform X1. (477 aa)
TAF4Transcription initiation factor TFIID subunit 4. (668 aa)
POLR2MDNA-directed RNA polymerase II subunit GRINL1A isoform X1. (370 aa)
PAF1RNA polymerase II-associated factor 1 homolog isoform X2. (528 aa)
TCEA1Transcription elongation factor A protein 1 isoform X1. (301 aa)
TAF13Transcription initiation factor TFIID subunit 13. (124 aa)
POLR2LDNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
RPRD1ARegulation of nuclear pre-mRNA domain-containing protein 1A isoform X1. (313 aa)
POLR2DDNA-directed RNA polymerase II subunit RPB4. (142 aa)
TAF3Transcription initiation factor TFIID subunit 3. (774 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1. (210 aa)
GTF2H3General transcription factor IIH subunit 3. (162 aa)
POLR3HDNA-directed RNA polymerase III subunit RPC8 isoform X1. (204 aa)
TAF5Lannotation not available (589 aa)
POLR2KDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
TAF12Transcription initiation factor TFIID subunit 12 isoform X1. (161 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
GTF2H2General transcription factor IIH subunit. (395 aa)
CD3EAPDNA-directed RNA polymerase I subunit RPA34. (522 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1. (114 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1712 aa)
LOC102742396DNA-directed RNA polymerase I subunit RPA2-like. (304 aa)
POLA2DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (595 aa)
GTF2F2General transcription factor IIF subunit 2. (239 aa)
SUPT3HTranscription initiation protein SPT3 homolog. (377 aa)
LOC102726582DNA-directed RNA polymerase II subunit RPB11-like isoform X1. (117 aa)
LOC102725801Uroplakin-3b-like protein-like. (252 aa)
LEO1RNA polymerase-associated protein LEO1. (570 aa)
GTF2E1General transcription factor IIE subunit 1. (438 aa)
GTF2E2Transcription initiation factor IIE subunit beta. (240 aa)
TAF7Transcription initiation factor TFIID subunit 7. (349 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
LAP3Cytosol aminopeptidase isoform X1. (241 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
POLR3GDNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (223 aa)
POLR3EDNA-directed RNA polymerase III subunit RPC5 isoform X1. (710 aa)
POLA1DNA polymerase. (1423 aa)
POLR3FDNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (316 aa)
LOC102745331Transcription initiation factor TFIID subunit 8-like. (269 aa)
LOC102741776DNA-directed RNA polymerase III subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs. (218 aa)
LOC102746675DNA primase small subunit-like. (156 aa)
LOC102741471Parafibromin-like. (141 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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