(30 nodes) Chemokine interleukin-8-like domain network (Leptonychotes weddellii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	IL8	Multifunctional fusion protein; Belongs to the intercrine alpha (chemokine CxC) family. (104 aa)
	PPBP	LOW QUALITY PROTEIN: platelet basic protein. (119 aa)
	PF4	C-X-C motif chemokine. (106 aa)
	CXCL6	C-X-C motif chemokine. (113 aa)
	LOC102725792	C-C motif chemokine. (92 aa)
	LOC102726694	C-C motif chemokine. (121 aa)
	CCL25	LOW QUALITY PROTEIN: c-C motif chemokine 25. (146 aa)
	CCL24	c-C motif chemokine 24. (119 aa)
	CCL26	C-C motif chemokine. (94 aa)
	CCL21	c-C motif chemokine 21. (137 aa)
	CCL19	C-C motif chemokine. (100 aa)
	CCL13	C-C motif chemokine. (98 aa)
	CCL8	c-C motif chemokine 8. (99 aa)
	CCL7	LOW QUALITY PROTEIN: c-C motif chemokine 7. (99 aa)
	CCL1	c-C motif chemokine 1. (94 aa)
	CXCL13	c-X-C motif chemokine 13. (110 aa)
	CXCL9	C-X-C motif chemokine. (126 aa)
	CXCL10	C-X-C motif chemokine. (98 aa)
	LOC102740920	C-C motif chemokine. (91 aa)
	CXCL11	c-X-C motif chemokine 11. (100 aa)
	XCL1	Lymphotactin. (112 aa)
	CXCL14	c-X-C motif chemokine 14. (99 aa)
	LOC102735431	C-C motif chemokine. (93 aa)
	CCL17	c-C motif chemokine 17. (99 aa)
	CCL14	c-C motif chemokine 14. (96 aa)
	CCL16	c-C motif chemokine 16. (108 aa)
	CCL20	C-C motif chemokine. (89 aa)
	LOC102742576	C-X-C motif chemokine. (107 aa)
	LOC102747754	Fractalkine-like. (221 aa)
	CXCL12	Stromal cell-derived factor 1 isoform X1; Belongs to the intercrine alpha (chemokine CxC) family. (119 aa)

Your Current Organism:

Leptonychotes weddellii

NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCL1	CCL16	A0A2U3YDB1	A0A2U3Z2Y3	c-C motif chemokine 1.	c-C motif chemokine 16.	0.643
CCL1	CCL17	A0A2U3YDB1	A0A2U3YY27	c-C motif chemokine 1.	c-C motif chemokine 17.	0.721
CCL1	CCL20	A0A2U3YDB1	A0A2U3Z480	c-C motif chemokine 1.	C-C motif chemokine.	0.683
CCL1	CCL21	A0A2U3YDB1	A0A2U3Y6G1	c-C motif chemokine 1.	c-C motif chemokine 21.	0.639
CCL1	CCL24	A0A2U3YDB1	A0A2U3XR83	c-C motif chemokine 1.	c-C motif chemokine 24.	0.647
CCL1	CCL26	A0A2U3YDB1	A0A2U3XRB4	c-C motif chemokine 1.	C-C motif chemokine.	0.516
CCL1	CCL8	A0A2U3YDB1	A0A2U3YD74	c-C motif chemokine 1.	c-C motif chemokine 8.	0.527
CCL1	CXCL10	A0A2U3YDB1	A0A2U3YK42	c-C motif chemokine 1.	C-X-C motif chemokine.	0.823
CCL1	CXCL11	A0A2U3YDB1	A0A2U3YKH5	c-C motif chemokine 1.	c-X-C motif chemokine 11.	0.976
CCL1	CXCL12	A0A2U3YDB1	A0A2U3X9U4	c-C motif chemokine 1.	Stromal cell-derived factor 1 isoform X1; Belongs to the intercrine alpha (chemokine CxC) family.	0.652
CCL1	CXCL13	A0A2U3YDB1	A0A2U3YIF7	c-C motif chemokine 1.	c-X-C motif chemokine 13.	0.652
CCL1	CXCL6	A0A2U3YDB1	A0A2U3XEV9	c-C motif chemokine 1.	C-X-C motif chemokine.	0.665
CCL1	CXCL9	A0A2U3YDB1	A0A2U3YK39	c-C motif chemokine 1.	C-X-C motif chemokine.	0.821
CCL1	IL8	A0A2U3YDB1	A0A2U3XEG2	c-C motif chemokine 1.	Multifunctional fusion protein; Belongs to the intercrine alpha (chemokine CxC) family.	0.752
CCL1	LOC102735431	A0A2U3YDB1	A0A2U3YXW3	c-C motif chemokine 1.	C-C motif chemokine.	0.593
CCL1	LOC102740920	A0A2U3YDB1	A0A2U3YKC3	c-C motif chemokine 1.	C-C motif chemokine.	0.683
CCL1	LOC102742576	A0A2U3YDB1	A0A2U3Z7N1	c-C motif chemokine 1.	C-X-C motif chemokine.	0.650
CCL1	LOC102747754	A0A2U3YDB1	A0A2U3Z884	c-C motif chemokine 1.	Fractalkine-like.	0.453
CCL1	XCL1	A0A2U3YDB1	A0A2U3YSG0	c-C motif chemokine 1.	Lymphotactin.	0.489
CCL13	CCL17	A0A2U3YD71	A0A2U3YY27	C-C motif chemokine.	c-C motif chemokine 17.	0.472