15 items (Leptonychotes weddellii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102741082	DLA class II histocompatibility antigen, DR-1 beta chain-like. (266 aa)
	LOC102743982	LOW QUALITY PROTEIN: zinc-alpha-2-glycoprotein-like; Belongs to the MHC class I family. (313 aa)
	PROCR	Endothelial protein C receptor. (241 aa)
	LOC102735909	Class I histocompatibility antigen, Gogo-C*0203 alpha chain-like; Belongs to the MHC class I family. (309 aa)
	FCGRT	IgG receptor FcRn large subunit p51; Belongs to the MHC class I family. (355 aa)
	LOC102740784	HLA class II histocompatibility antigen, DR alpha chain-like; Belongs to the MHC class II family. (254 aa)
	LOC102734456	HLA class II histocompatibility antigen, DO alpha chain-like; Belongs to the MHC class II family. (250 aa)
	LOC102742806	T-cell surface glycoprotein CD1b-like. (349 aa)
	LOC102738001	T-cell surface glycoprotein CD1a-like. (339 aa)
	CD1C	T-cell surface glycoprotein CD1c. (337 aa)
	LOC102738307	T-cell surface glycoprotein CD1a-like. (340 aa)
	LOC102750166	HLA class II histocompatibility antigen, DM beta chain-like. (263 aa)
	LOC102750454	HLA class II histocompatibility antigen, DM alpha chain-like; Belongs to the MHC class II family. (261 aa)
	LOC102748462	HLA class II histocompatibility antigen, DO beta chain-like. (273 aa)
	LOC102747485	HLA class II histocompatibility antigen, DQ beta 2 chain-like isoform X2. (329 aa)

Your Current Organism:

Leptonychotes weddellii

NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FCGRT	LOC102735909	A0A2U3Z027	A0A2U3YSE9	IgG receptor FcRn large subunit p51; Belongs to the MHC class I family.	Class I histocompatibility antigen, Gogo-C*0203 alpha chain-like; Belongs to the MHC class I family.	0.477
LOC102734456	LOC102740784	A0A2U3Z2X5	A0A2U3XXW2	HLA class II histocompatibility antigen, DO alpha chain-like; Belongs to the MHC class II family.	HLA class II histocompatibility antigen, DR alpha chain-like; Belongs to the MHC class II family.	0.944
LOC102734456	LOC102741082	A0A2U3Z2X5	A0A2U3XXW7	HLA class II histocompatibility antigen, DO alpha chain-like; Belongs to the MHC class II family.	DLA class II histocompatibility antigen, DR-1 beta chain-like.	0.942
LOC102734456	LOC102747485	A0A2U3Z2X5	A0A2U3Y330	HLA class II histocompatibility antigen, DO alpha chain-like; Belongs to the MHC class II family.	HLA class II histocompatibility antigen, DQ beta 2 chain-like isoform X2.	0.836
LOC102734456	LOC102748462	A0A2U3Z2X5	A0A2U3Y332	HLA class II histocompatibility antigen, DO alpha chain-like; Belongs to the MHC class II family.	HLA class II histocompatibility antigen, DO beta chain-like.	0.981
LOC102734456	LOC102750166	A0A2U3Z2X5	A0A2U3Y3B4	HLA class II histocompatibility antigen, DO alpha chain-like; Belongs to the MHC class II family.	HLA class II histocompatibility antigen, DM beta chain-like.	0.986
LOC102734456	LOC102750454	A0A2U3Z2X5	A0A2U3Y337	HLA class II histocompatibility antigen, DO alpha chain-like; Belongs to the MHC class II family.	HLA class II histocompatibility antigen, DM alpha chain-like; Belongs to the MHC class II family.	0.961
LOC102735909	FCGRT	A0A2U3YSE9	A0A2U3Z027	Class I histocompatibility antigen, Gogo-C*0203 alpha chain-like; Belongs to the MHC class I family.	IgG receptor FcRn large subunit p51; Belongs to the MHC class I family.	0.477
LOC102735909	LOC102743982	A0A2U3YSE9	A0A2U3YX42	Class I histocompatibility antigen, Gogo-C*0203 alpha chain-like; Belongs to the MHC class I family.	LOW QUALITY PROTEIN: zinc-alpha-2-glycoprotein-like; Belongs to the MHC class I family.	0.477
LOC102738001	LOC102742806	A0A2U3YB44	A0A2U3YB54	T-cell surface glycoprotein CD1a-like.	T-cell surface glycoprotein CD1b-like.	0.796
LOC102740784	LOC102734456	A0A2U3XXW2	A0A2U3Z2X5	HLA class II histocompatibility antigen, DR alpha chain-like; Belongs to the MHC class II family.	HLA class II histocompatibility antigen, DO alpha chain-like; Belongs to the MHC class II family.	0.944
LOC102740784	LOC102741082	A0A2U3XXW2	A0A2U3XXW7	HLA class II histocompatibility antigen, DR alpha chain-like; Belongs to the MHC class II family.	DLA class II histocompatibility antigen, DR-1 beta chain-like.	0.991
LOC102740784	LOC102747485	A0A2U3XXW2	A0A2U3Y330	HLA class II histocompatibility antigen, DR alpha chain-like; Belongs to the MHC class II family.	HLA class II histocompatibility antigen, DQ beta 2 chain-like isoform X2.	0.962
LOC102740784	LOC102748462	A0A2U3XXW2	A0A2U3Y332	HLA class II histocompatibility antigen, DR alpha chain-like; Belongs to the MHC class II family.	HLA class II histocompatibility antigen, DO beta chain-like.	0.991
LOC102740784	LOC102750166	A0A2U3XXW2	A0A2U3Y3B4	HLA class II histocompatibility antigen, DR alpha chain-like; Belongs to the MHC class II family.	HLA class II histocompatibility antigen, DM beta chain-like.	0.998
LOC102740784	LOC102750454	A0A2U3XXW2	A0A2U3Y337	HLA class II histocompatibility antigen, DR alpha chain-like; Belongs to the MHC class II family.	HLA class II histocompatibility antigen, DM alpha chain-like; Belongs to the MHC class II family.	0.998
LOC102741082	LOC102734456	A0A2U3XXW7	A0A2U3Z2X5	DLA class II histocompatibility antigen, DR-1 beta chain-like.	HLA class II histocompatibility antigen, DO alpha chain-like; Belongs to the MHC class II family.	0.942
LOC102741082	LOC102740784	A0A2U3XXW7	A0A2U3XXW2	DLA class II histocompatibility antigen, DR-1 beta chain-like.	HLA class II histocompatibility antigen, DR alpha chain-like; Belongs to the MHC class II family.	0.991
LOC102741082	LOC102747485	A0A2U3XXW7	A0A2U3Y330	DLA class II histocompatibility antigen, DR-1 beta chain-like.	HLA class II histocompatibility antigen, DQ beta 2 chain-like isoform X2.	0.546
LOC102741082	LOC102748462	A0A2U3XXW7	A0A2U3Y332	DLA class II histocompatibility antigen, DR-1 beta chain-like.	HLA class II histocompatibility antigen, DO beta chain-like.	0.912