(14 nodes) GPCR family 2, extracellular hormone receptor domain superfamily network (Leptonychotes weddellii)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102727755	Latrophilin-3-like; Belongs to the G-protein coupled receptor 2 family. (1533 aa)
	CALCRL	Calcitonin gene-related peptide type 1 receptor; Belongs to the G-protein coupled receptor 2 family. (410 aa)
	GPR113	LOW QUALITY PROTEIN: probable G-protein coupled receptor 113; Belongs to the G-protein coupled receptor 2 family. (999 aa)
	CALCR	Calcitonin receptor; Belongs to the G-protein coupled receptor 2 family. (392 aa)
	PTH2R	Parathyroid hormone 2 receptor; Belongs to the G-protein coupled receptor 2 family. (584 aa)
	PTH1R	LOW QUALITY PROTEIN: parathyroid hormone/parathyroid hormone-related peptide receptor; Belongs to the G-protein coupled receptor 2 family. (608 aa)
	GPR124	G-protein coupled receptor 124; Belongs to the G-protein coupled receptor 2 family. (1332 aa)
	LPHN2	Latrophilin-2-like isoform X1; Belongs to the G-protein coupled receptor 2 family. (1403 aa)
	LOC102750957	Cadherin EGF LAG seven-pass G-type receptor 2-like. (2324 aa)
	GCGR	Glucagon receptor; Belongs to the G-protein coupled receptor 2 family. (474 aa)
	LOC102750183	Corticotropin-releasing factor receptor 1-like; Belongs to the G-protein coupled receptor 2 family. (357 aa)
	VIPR1	Vasoactive intestinal polypeptide receptor 1 isoform X2; Belongs to the G-protein coupled receptor 2 family. (418 aa)
	LOC102743561	Corticotropin-releasing factor receptor 2-like. (76 aa)
	LOC102748835	Glucagon-like peptide 1 receptor-like; Belongs to the G-protein coupled receptor 2 family. (368 aa)

Your Current Organism:

Leptonychotes weddellii

NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CALCR	CALCRL	A0A2U3XNE7	A0A2U3X6F2	Calcitonin receptor; Belongs to the G-protein coupled receptor 2 family.	Calcitonin gene-related peptide type 1 receptor; Belongs to the G-protein coupled receptor 2 family.	0.887
CALCRL	CALCR	A0A2U3X6F2	A0A2U3XNE7	Calcitonin gene-related peptide type 1 receptor; Belongs to the G-protein coupled receptor 2 family.	Calcitonin receptor; Belongs to the G-protein coupled receptor 2 family.	0.887
GCGR	LOC102748835	A0A2U3YHV1	A0A2U3Z782	Glucagon receptor; Belongs to the G-protein coupled receptor 2 family.	Glucagon-like peptide 1 receptor-like; Belongs to the G-protein coupled receptor 2 family.	0.534
GPR113	GPR124	A0A2U3XN86	A0A2U3YCR3	LOW QUALITY PROTEIN: probable G-protein coupled receptor 113; Belongs to the G-protein coupled receptor 2 family.	G-protein coupled receptor 124; Belongs to the G-protein coupled receptor 2 family.	0.527
GPR124	GPR113	A0A2U3YCR3	A0A2U3XN86	G-protein coupled receptor 124; Belongs to the G-protein coupled receptor 2 family.	LOW QUALITY PROTEIN: probable G-protein coupled receptor 113; Belongs to the G-protein coupled receptor 2 family.	0.527
GPR124	LOC102727755	A0A2U3YCR3	A0A2U3X6I5	G-protein coupled receptor 124; Belongs to the G-protein coupled receptor 2 family.	Latrophilin-3-like; Belongs to the G-protein coupled receptor 2 family.	0.889
GPR124	LPHN2	A0A2U3YCR3	A0A2U3YD84	G-protein coupled receptor 124; Belongs to the G-protein coupled receptor 2 family.	Latrophilin-2-like isoform X1; Belongs to the G-protein coupled receptor 2 family.	0.862
LOC102727755	GPR124	A0A2U3X6I5	A0A2U3YCR3	Latrophilin-3-like; Belongs to the G-protein coupled receptor 2 family.	G-protein coupled receptor 124; Belongs to the G-protein coupled receptor 2 family.	0.889
LOC102743561	LOC102750183	A0A2U3Z0K0	A0A2U3YJ45	Corticotropin-releasing factor receptor 2-like.	Corticotropin-releasing factor receptor 1-like; Belongs to the G-protein coupled receptor 2 family.	0.926
LOC102748835	GCGR	A0A2U3Z782	A0A2U3YHV1	Glucagon-like peptide 1 receptor-like; Belongs to the G-protein coupled receptor 2 family.	Glucagon receptor; Belongs to the G-protein coupled receptor 2 family.	0.534
LOC102750183	LOC102743561	A0A2U3YJ45	A0A2U3Z0K0	Corticotropin-releasing factor receptor 1-like; Belongs to the G-protein coupled receptor 2 family.	Corticotropin-releasing factor receptor 2-like.	0.926
LPHN2	GPR124	A0A2U3YD84	A0A2U3YCR3	Latrophilin-2-like isoform X1; Belongs to the G-protein coupled receptor 2 family.	G-protein coupled receptor 124; Belongs to the G-protein coupled receptor 2 family.	0.862