STRINGSTRING
LOC102728200 LOC102728200 LOC102746862 LOC102746862 MYD88 MYD88 LOC102747337 LOC102747337 UBA52 UBA52 IKBKB IKBKB LOC102730779 LOC102730779 LOC102728244 LOC102728244 NGF NGF TRAF6 TRAF6 PRKCI PRKCI LOC102729636 LOC102729636 LOC102750322 LOC102750322 NFKB1 NFKB1 NFKBIA NFKBIA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102728200ubiquitin-40S ribosomal protein S27a-like. (154 aa)
LOC102746862ubiquitin-40S ribosomal protein S27a-like isoform X1. (156 aa)
MYD88Myeloid differentiation primary response protein MyD88; Adapter protein involved in the Toll-like receptor and IL-1 receptor signaling pathway in the innate immune response. (296 aa)
LOC102747337ubiquitin-40S ribosomal protein S27a-like. (154 aa)
UBA52ubiquitin-60S ribosomal protein L40 isoform X3. (128 aa)
IKBKBInhibitor of nuclear factor kappa-B kinase subunit beta isoform X1. (756 aa)
LOC102730779Coiled-coil domain-containing protein 71L-like. (112 aa)
LOC102728244Interleukin-1 receptor-associated kinase 1-like. (299 aa)
NGFBeta-nerve growth factor; Belongs to the NGF-beta family. (241 aa)
TRAF6TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (541 aa)
PRKCIProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (543 aa)
LOC102729636polyubiquitin-B-like. (77 aa)
LOC102750322polyubiquitin-B-like. (153 aa)
NFKB1Nuclear factor NF-kappa-B p105 subunit. (254 aa)
NFKBIANF-kappa-B inhibitor alpha isoform X2. (314 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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