STRINGSTRING
RDH5 RDH5 PTCHD4 PTCHD4 LRAT LRAT NAPEPLD NAPEPLD PTCHD1 PTCHD1 RDH11 RDH11 RBP3 RBP3 LOC102744781 LOC102744781 LOC102726129 LOC102726129 LOC102745793 LOC102745793 HSD17B6 HSD17B6 TTR TTR RHO RHO PTCHD3 PTCHD3 RDH12 RDH12 LOC102743691 LOC102743691 RDH10 RDH10 PLEKHD1 PLEKHD1 DHRS9 DHRS9 RBP1 RBP1 RBP4 RBP4 LOC102743168 LOC102743168
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RDH511-cis retinol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (318 aa)
PTCHD4Patched domain-containing protein 4. (846 aa)
LRATLecithin retinol acyltransferase. (230 aa)
NAPEPLDN-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D isoform X1. (394 aa)
PTCHD1Patched domain-containing protein 1. (776 aa)
RDH11Retinol dehydrogenase 11; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (290 aa)
RBP3Retinol-binding protein 3. (1258 aa)
LOC102744781LOW QUALITY PROTEIN: retinol dehydrogenase 8-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (332 aa)
LOC102726129Cytochrome P450 4V2-like; Belongs to the cytochrome P450 family. (524 aa)
LOC102745793Short-chain dehydrogenase/reductase family 9C member 7-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (248 aa)
HSD17B617-beta-hydroxysteroid dehydrogenase type 6; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (317 aa)
TTRTransthyretin; Thyroid hormone-binding protein. Probably transports thyroxine from the bloodstream to the brain. (147 aa)
RHORhodopsin. (348 aa)
PTCHD3LOW QUALITY PROTEIN: patched domain-containing protein 3. (919 aa)
RDH12Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (258 aa)
LOC102743691Acid sphingomyelinase-like phosphodiesterase 3a-like. (167 aa)
RDH10Retinol dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (341 aa)
PLEKHD1Pleckstrin homology domain-containing family D member 1. (506 aa)
DHRS9Dehydrogenase/reductase SDR family member 9; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (319 aa)
RBP1Retinol-binding protein 1; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family. (135 aa)
RBP4Retinol-binding protein; Retinol-binding protein that mediates retinol transport in blood plasma. (201 aa)
LOC102743168Retinoid isomerohydrolase-like. (364 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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