15 items (Leptonychotes weddellii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102736050	Glycogen debranching enzyme-like. (231 aa)
	LOC102742354	Phosphoglucomutase-1-like. (195 aa)
	LOC102734732	Glycogenin-2-like. (244 aa)
	GYG1	Glycogenin-1. (455 aa)
	CALM3	Calmodulin isoform X1; Belongs to the calmodulin family. (149 aa)
	PHKA2	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family. (617 aa)
	PYGM	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (625 aa)
	KIAA1161	Uncharacterized family 31 glucosidase KIAA1161 homolog; Belongs to the glycosyl hydrolase 31 family. (714 aa)
	LOC102747663	Spermatid-specific manchette-related protein 1-like isoform X1. (164 aa)
	LOC102738071	Calmodulin-like; Belongs to the calmodulin family. (113 aa)
	PYGL	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (851 aa)
	PHKG1	Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform isoform X1; Belongs to the protein kinase superfamily. (387 aa)
	VAX2	Ventral anterior homeobox 2. (283 aa)
	LOC102730944	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family. (90 aa)
	PHKG2	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform. (352 aa)

Your Current Organism:

Leptonychotes weddellii

NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CALM3	LOC102730944	A0A2U3YN48	A0A2U3Z8L2	Calmodulin isoform X1; Belongs to the calmodulin family.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	0.644
CALM3	PHKA2	A0A2U3YN48	A0A2U3YA54	Calmodulin isoform X1; Belongs to the calmodulin family.	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	0.863
CALM3	PHKG1	A0A2U3YN48	A0A2U3XEM9	Calmodulin isoform X1; Belongs to the calmodulin family.	Phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform isoform X1; Belongs to the protein kinase superfamily.	0.841
CALM3	PHKG2	A0A2U3YN48	A0A2U3Z533	Calmodulin isoform X1; Belongs to the calmodulin family.	Phosphorylase b kinase gamma catalytic chain, liver/testis isoform.	0.867
CALM3	PYGL	A0A2U3YN48	A0A2U3XIB3	Calmodulin isoform X1; Belongs to the calmodulin family.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.825
CALM3	PYGM	A0A2U3YN48	A0A2U3Y0E0	Calmodulin isoform X1; Belongs to the calmodulin family.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.823
GYG1	KIAA1161	A0A2U3YP50	A0A2U3XTC4	Glycogenin-1.	Uncharacterized family 31 glucosidase KIAA1161 homolog; Belongs to the glycosyl hydrolase 31 family.	0.546
GYG1	LOC102734732	A0A2U3YP50	A0A2U3YVR9	Glycogenin-1.	Glycogenin-2-like.	0.966
GYG1	LOC102736050	A0A2U3YP50	A0A2U3Z8K4	Glycogenin-1.	Glycogen debranching enzyme-like.	0.985
GYG1	LOC102747663	A0A2U3YP50	A0A2U3XT74	Glycogenin-1.	Spermatid-specific manchette-related protein 1-like isoform X1.	0.546
GYG1	PYGL	A0A2U3YP50	A0A2U3XIB3	Glycogenin-1.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.734
GYG1	PYGM	A0A2U3YP50	A0A2U3Y0E0	Glycogenin-1.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.755
KIAA1161	GYG1	A0A2U3XTC4	A0A2U3YP50	Uncharacterized family 31 glucosidase KIAA1161 homolog; Belongs to the glycosyl hydrolase 31 family.	Glycogenin-1.	0.546
KIAA1161	LOC102734732	A0A2U3XTC4	A0A2U3YVR9	Uncharacterized family 31 glucosidase KIAA1161 homolog; Belongs to the glycosyl hydrolase 31 family.	Glycogenin-2-like.	0.480
KIAA1161	LOC102736050	A0A2U3XTC4	A0A2U3Z8K4	Uncharacterized family 31 glucosidase KIAA1161 homolog; Belongs to the glycosyl hydrolase 31 family.	Glycogen debranching enzyme-like.	0.504
KIAA1161	LOC102747663	A0A2U3XTC4	A0A2U3XT74	Uncharacterized family 31 glucosidase KIAA1161 homolog; Belongs to the glycosyl hydrolase 31 family.	Spermatid-specific manchette-related protein 1-like isoform X1.	0.544
KIAA1161	PYGL	A0A2U3XTC4	A0A2U3XIB3	Uncharacterized family 31 glucosidase KIAA1161 homolog; Belongs to the glycosyl hydrolase 31 family.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.503
KIAA1161	PYGM	A0A2U3XTC4	A0A2U3Y0E0	Uncharacterized family 31 glucosidase KIAA1161 homolog; Belongs to the glycosyl hydrolase 31 family.	Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.	0.503
LOC102730944	CALM3	A0A2U3Z8L2	A0A2U3YN48	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Calmodulin isoform X1; Belongs to the calmodulin family.	0.644
LOC102730944	LOC102738071	A0A2U3Z8L2	A0A2U3XLG6	Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.	Calmodulin-like; Belongs to the calmodulin family.	0.644