STRINGSTRING
UBTFL1 UBTFL1 LOC102730819 LOC102730819 LOC102745317 LOC102745317 LOC102745013 LOC102745013 LOC102743898 LOC102743898 CCNH CCNH ERCC6 ERCC6 RRN3 RRN3 POLR1E POLR1E DMTF1 DMTF1 MNAT1 MNAT1 MTA2 MTA2 CBX3 CBX3 LOC102731039 LOC102731039 MBD2 MBD2 TAF1D TAF1D HDAC1 HDAC1 RBBP4 RBBP4 LOC102742187 LOC102742187 LOC102744317 LOC102744317 LOC102739804 LOC102739804 LOC102726286 LOC102726286 LOC102746084 LOC102746084 LOC102750817 LOC102750817 LOC102728431 LOC102728431 LOC102732990 LOC102732990 TBPL2 TBPL2 RBBP7 RBBP7 LOC102737083 LOC102737083 LOC102738290 LOC102738290 LOC102742396 LOC102742396 LOC102738587 LOC102738587 CHD4 CHD4 POLR1A POLR1A POLR2H POLR2H EHMT2 EHMT2 CD3EAP CD3EAP ERCC2 ERCC2 UBTF UBTF GTF2H2 GTF2H2 LOC102726804 LOC102726804 GTF2H5 GTF2H5 TAF1C TAF1C POLR2K POLR2K GTF2H3 GTF2H3 POLR2E POLR2E POLR2L POLR2L TAF1A TAF1A HDAC2 HDAC2 GATAD2B GATAD2B GATAD2A GATAD2A TBP TBP LOC102741823 LOC102741823 LOC102747225 LOC102747225 GTF2H1 GTF2H1 TBPL1 TBPL1 ERCC3 ERCC3 LOC102732330 LOC102732330 LOC102731009 LOC102731009 POLR2F POLR2F ZNRD1 ZNRD1 LOC102750992 LOC102750992 POLR1C POLR1C LOC102725568 LOC102725568 LOC102730207 LOC102730207
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
UBTFL1LOW QUALITY PROTEIN: upstream binding transcription factor, RNA polymerase I-like 1. (300 aa)
LOC102730819Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102745317Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102745013Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102743898Histone H2B type W-T-like; Belongs to the histone H2B family. (174 aa)
CCNHcyclin-H-like; Belongs to the cyclin family. (344 aa)
ERCC6DNA excision repair protein ERCC-6. (457 aa)
RRN3RNA polymerase I-specific transcription initiation factor RRN3 isoform X1. (651 aa)
POLR1EDNA-directed RNA polymerase I subunit RPA49 isoform X1. (419 aa)
DMTF1cyclin-D-binding Myb-like transcription factor 1 isoform X1. (761 aa)
MNAT1CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
MTA2Metastasis-associated protein MTA2 isoform X1. (668 aa)
CBX3Chromobox protein homolog 3. (176 aa)
LOC102731039Histone H3.3-like. (128 aa)
MBD2methyl-CpG-binding domain protein 2. (212 aa)
TAF1DTATA box-binding protein-associated factor RNA polymerase I subunit D. (272 aa)
HDAC1Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (482 aa)
RBBP4Histone-binding protein RBBP4. (380 aa)
LOC102742187Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102744317Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102739804Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102726286Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (78 aa)
LOC102746084Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC102750817Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102728431Histone H2B; Belongs to the histone H2B family. (119 aa)
LOC102732990Histone H2A; Belongs to the histone H2A family. (140 aa)
TBPL2TATA box-binding protein-like protein 2. (344 aa)
RBBP7Histone-binding protein RBBP7 isoform X1. (469 aa)
LOC102737083Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102738290Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102742396DNA-directed RNA polymerase I subunit RPA2-like. (304 aa)
LOC102738587Histone H2B subacrosomal variant-like; Belongs to the histone H2B family. (122 aa)
CHD4chromodomain-helicase-DNA-binding protein 4 isoform X2. (1912 aa)
POLR1ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1712 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1. (114 aa)
EHMT2Histone-lysine N-methyltransferase EHMT2 isoform X1. (1268 aa)
CD3EAPDNA-directed RNA polymerase I subunit RPA34. (522 aa)
ERCC2TFIIH basal transcription factor complex helicase XPD subunit. (661 aa)
UBTFNucleolar transcription factor 1 isoform X1. (764 aa)
GTF2H2General transcription factor IIH subunit. (395 aa)
LOC102726804Histone H2B; Belongs to the histone H2B family. (126 aa)
GTF2H5General transcription factor IIH subunit 5. (71 aa)
TAF1CTATA box-binding protein-associated factor RNA polymerase I subunit C. (849 aa)
POLR2KDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
GTF2H3General transcription factor IIH subunit 3. (162 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1. (210 aa)
POLR2LDNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
TAF1ATATA box-binding protein-associated factor RNA polymerase I subunit A. (450 aa)
HDAC2Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (488 aa)
GATAD2BTranscriptional repressor p66-beta. (593 aa)
GATAD2ATranscriptional repressor p66-alpha isoform X1. (543 aa)
TBPTATA-box-binding protein. (322 aa)
LOC102741823DNA-directed RNA polymerase I subunit RPA2-like. (293 aa)
LOC102747225DNA-directed RNA polymerase I subunit RPA43-like. (316 aa)
GTF2H1General transcription factor IIH subunit 1. (441 aa)
TBPL1TATA box-binding protein-like protein 1. (186 aa)
ERCC3TFIIH basal transcription factor complex helicase XPB subunit. (782 aa)
LOC102732330Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102731009DNA-directed RNA polymerase I subunit RPA43-like. (116 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (127 aa)
ZNRD1DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (123 aa)
LOC102750992Histone H2B; Belongs to the histone H2B family. (127 aa)
POLR1CDNA-directed RNA polymerases I and III subunit RPAC1. (346 aa)
LOC102725568Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC102730207Histone H2A; Belongs to the histone H2A family. (143 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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