STRINGSTRING
LOC102744317 LOC102744317 LOC102728431 LOC102728431 ZFP42 ZFP42 CHD1 CHD1 CCNT1 CCNT1 FOXA1 FOXA1 EP300 EP300 KAT2B KAT2B POLR2G POLR2G PGR PGR USF2 USF2 CXXC5 CXXC5 POLR2B POLR2B POLR2I POLR2I LOC102731039 LOC102731039 KANK4 KANK4 KANK3 KANK3 LOC102725801 LOC102725801 LOC102726582 LOC102726582 HDAC1 HDAC1 LOC102745454 LOC102745454 NRIP1 NRIP1 ZC3H12D ZC3H12D LOC102742187 LOC102742187 LOC102739804 LOC102739804 LOC102726286 LOC102726286 LOC102746084 LOC102746084 LOC102750817 LOC102750817 GTF2F2 GTF2F2 LOC102732990 LOC102732990 TBPL2 TBPL2 LOC102737083 LOC102737083 LOC102738290 LOC102738290 KDM1A KDM1A LOC102738587 LOC102738587 MYB MYB POLR2H POLR2H ZC3H12B ZC3H12B FOSB FOSB LOC102726804 LOC102726804 POLR2A POLR2A POLR2K POLR2K CITED1 CITED1 POLR2E POLR2E YY1 YY1 GATA3 GATA3 NCOA1 NCOA1 POLR2D POLR2D CBFB CBFB SP1 SP1 POLR2L POLR2L PRMT8 PRMT8 LOC102746898 LOC102746898 CDK9 CDK9 KANK2 KANK2 PRMT1 PRMT1 NCOA3 NCOA3 USF1 USF1 TBP TBP GTF2A1L GTF2A1L FOS FOS JUND JUND CREBBP CREBBP MED1 MED1 TBPL1 TBPL1 LOC102732330 LOC102732330 POLR2F POLR2F TFF3 TFF3 POLR2C POLR2C LOC102750992 LOC102750992 LOC102726367 LOC102726367 LOC102725568 LOC102725568 LOC102730207 LOC102730207 LOC102740552 LOC102740552 LOC102733739 LOC102733739 LOC102730819 LOC102730819 LOC102745317 LOC102745317 LOC102745013 LOC102745013 ZC3H12C ZC3H12C LOC102728905 LOC102728905 LOC102743898 LOC102743898 LOC102745021 LOC102745021 LOC102725974 LOC102725974
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102744317Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102728431Histone H2B; Belongs to the histone H2B family. (119 aa)
ZFP42Zinc finger protein 42 homolog. (312 aa)
CHD1chromodomain-helicase-DNA-binding protein 1 isoform X1. (1797 aa)
CCNT1cyclin-T1 isoform X1; Belongs to the cyclin family. (726 aa)
FOXA1Hepatocyte nuclear factor 3-alpha. (473 aa)
EP300Histone acetyltransferase p300. (2425 aa)
KAT2BHistone acetyltransferase KAT2B. (735 aa)
POLR2GDNA-directed RNA polymerase II subunit RPB7. (172 aa)
PGRProgesterone receptor. (827 aa)
USF2Upstream stimulatory factor 2. (328 aa)
CXXC5CXXC-type zinc finger protein 5. (314 aa)
POLR2BDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
POLR2IDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (125 aa)
LOC102731039Histone H3.3-like. (128 aa)
KANK4KN motif and ankyrin repeat domain-containing protein 4. (1015 aa)
KANK3KN motif and ankyrin repeat domain-containing protein 3. (841 aa)
LOC102725801Uroplakin-3b-like protein-like. (252 aa)
LOC102726582DNA-directed RNA polymerase II subunit RPB11-like isoform X1. (117 aa)
HDAC1Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (482 aa)
LOC102745454Nuclear receptor coactivator 3-like. (176 aa)
NRIP1Nuclear receptor-interacting protein 1 isoform X1. (1156 aa)
ZC3H12DProbable ribonuclease ZC3H12D. (148 aa)
LOC102742187Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102739804Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102726286Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (78 aa)
LOC102746084Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
LOC102750817Histone H2B; Belongs to the histone H2B family. (126 aa)
GTF2F2General transcription factor IIF subunit 2. (239 aa)
LOC102732990Histone H2A; Belongs to the histone H2A family. (140 aa)
TBPL2TATA box-binding protein-like protein 2. (344 aa)
LOC102737083Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102738290Histone H2B; Belongs to the histone H2B family. (126 aa)
KDM1ALysine-specific histone demethylase; Histone demethylase that demethylates both 'Lys-4' (H3K4me) and 'Lys-9' (H3K9me) of histone H3, thereby acting as a coactivator or a corepressor, depending on the context. Acts by oxidizing the substrate by FAD to generate the corresponding imine that is subsequently hydrolyzed. Acts as a corepressor by mediating demethylation of H3K4me, a specific tag for epigenetic transcriptional activation. Demethylates both mono- (H3K4me1) and di-methylated (H3K4me2) H3K4me; Belongs to the flavin monoamine oxidase family. (876 aa)
LOC102738587Histone H2B subacrosomal variant-like; Belongs to the histone H2B family. (122 aa)
MYBTranscriptional activator Myb isoform X1. (761 aa)
POLR2HDNA-directed RNA polymerases I, II, and III subunit RPABC3 isoform X1. (114 aa)
ZC3H12BProbable ribonuclease ZC3H12B. (836 aa)
FOSBProtein fosB isoform X1. (335 aa)
LOC102726804Histone H2B; Belongs to the histone H2B family. (126 aa)
POLR2ADNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1970 aa)
POLR2KDNA-directed RNA polymerases I, II, and III subunit RPABC4. (58 aa)
CITED1Cbp/p300-interacting transactivator 1 isoform X2. (197 aa)
POLR2EDNA-directed RNA polymerases I, II, and III subunit RPABC1 isoform X1. (210 aa)
YY1Transcriptional repressor protein YY1. (410 aa)
GATA3Trans-acting T-cell-specific transcription factor GATA-3 isoform X1. (444 aa)
NCOA1Nuclear receptor coactivator. (1441 aa)
POLR2DDNA-directed RNA polymerase II subunit RPB4. (142 aa)
CBFBCore-binding factor subunit beta isoform X1. (187 aa)
SP1Transcription factor Sp1 isoform X1. (786 aa)
POLR2LDNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
PRMT8Protein arginine N-methyltransferase 8; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (334 aa)
LOC102746898Protein GREB1-like. (1593 aa)
CDK9Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily. (372 aa)
KANK2KN motif and ankyrin repeat domain-containing protein 2. (419 aa)
PRMT1Protein arginine N-methyltransferase 1 isoform X1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (371 aa)
NCOA3Nuclear receptor coactivator 3-like. (1154 aa)
USF1Upstream stimulatory factor 1 isoform X1. (310 aa)
TBPTATA-box-binding protein. (322 aa)
GTF2A1LTFIIA-alpha and beta-like factor isoform X1. (477 aa)
FOSProto-oncogene c-Fos isoform X1. (380 aa)
JUNDTranscription factor jun-D. (298 aa)
CREBBPCREB-binding protein-like. (1411 aa)
MED1Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1582 aa)
TBPL1TATA box-binding protein-like protein 1. (186 aa)
LOC102732330Histone H3; Belongs to the histone H3 family. (136 aa)
POLR2FDNA-directed RNA polymerases I, II, and III subunit RPABC2. (127 aa)
TFF3Trefoil factor 3. (80 aa)
POLR2CDNA-directed RNA polymerase II subunit RPB3. (98 aa)
LOC102750992Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC102726367Heat shock protein HSP 90-alpha-like. (262 aa)
LOC102725568Histone H2B; Belongs to the histone H2B family. (127 aa)
LOC102730207Histone H2A; Belongs to the histone H2A family. (143 aa)
LOC102740552Receptor-binding cancer antigen expressed on SiSo cells; May participate in suppression of cell proliferation and induces apoptotic cell death through activation of interleukin-1-beta converting enzyme (ICE)-like proteases. (213 aa)
LOC102733739DNA-directed RNA polymerase II subunit RPB3-like. (189 aa)
LOC102730819Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102745317Histone H2B; Belongs to the histone H2B family. (126 aa)
LOC102745013Histone H3; Belongs to the histone H3 family. (136 aa)
ZC3H12CProbable ribonuclease ZC3H12C. (625 aa)
LOC102728905KN motif and ankyrin repeat domain-containing protein 1-like. (167 aa)
LOC102743898Histone H2B type W-T-like; Belongs to the histone H2B family. (174 aa)
LOC102745021Zinc finger transcription factor Trps1-like. (250 aa)
LOC102725974KN motif and ankyrin repeat domain-containing protein 1-like. (247 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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