STRINGSTRING
CTSB CTSB GABARAPL1 GABARAPL1 TAX1BP1 TAX1BP1 ATG12 ATG12 PINK1 PINK1 GABARAP GABARAP ATG5 ATG5 MMP9 MMP9
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CTSBCathepsin B; Belongs to the peptidase C1 family. (339 aa)
GABARAPL1Gamma-aminobutyric acid receptor-associated protein-like 1 isoform X1. (117 aa)
TAX1BP1Tax1-binding protein 1 homolog isoform X1. (686 aa)
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (140 aa)
PINK1Serine/threonine-protein kinase PINK1, mitochondrial. (488 aa)
GABARAPGamma-aminobutyric acid receptor-associated protein. (117 aa)
ATG5Autophagy protein 5; Involved in autophagic vesicle formation. (255 aa)
MMP9Matrix metalloproteinase-9. (704 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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