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USP8 USP8 PPP1CB PPP1CB UBE2L3 UBE2L3 SIRT4 SIRT4 SUMO3 SUMO3 AMBRA1 AMBRA1 USP35 USP35 VPS11 VPS11 PPP1CA PPP1CA VDAC2 VDAC2 PPEF1 PPEF1 VPS18 VPS18 NBR1 NBR1 STX17 STX17 USP15 USP15 LOC102737595 LOC102737595 ATG5 ATG5 GABARAP GABARAP PINK1 PINK1 MUL1 MUL1 BAK1 BAK1 PPP1CC PPP1CC ATG12 ATG12 UBE2N UBE2N SUMO1 SUMO1 PPP4C PPP4C SRC SRC PTEN PTEN USP33 USP33 VPS16 VPS16 PPP2CB PPP2CB FOXO3 FOXO3 TFEB TFEB SUMO2 SUMO2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
USP8Ubiquitin carboxyl-terminal hydrolase 8 isoform X1; Belongs to the peptidase C19 family. (1116 aa)
PPP1CBSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (327 aa)
UBE2L3Ubiquitin-conjugating enzyme E2 L3; Belongs to the ubiquitin-conjugating enzyme family. (154 aa)
SIRT4NAD-dependent protein lipoamidase sirtuin-4, mitochondrial; Acts as NAD-dependent protein lipoamidase, ADP-ribosyl transferase and deacetylase. Catalyzes more efficiently removal of lipoyl- and biotinyl- than acetyl-lysine modifications. Inhibits the pyruvate dehydrogenase complex (PDH) activity via the enzymatic hydrolysis of the lipoamide cofactor from the E2 component, DLAT, in a phosphorylation-independent manner. Catalyzes the transfer of ADP- ribosyl groups onto target proteins, including mitochondrial GLUD1, inhibiting GLUD1 enzyme activity. Acts as a negative regulator of mitoc [...] (314 aa)
SUMO3Small ubiquitin-related modifier. (111 aa)
AMBRA1Activating molecule in BECN1-regulated autophagy protein 1-like. (299 aa)
USP35Ubiquitin carboxyl-terminal hydrolase 35-like; Belongs to the peptidase C19 family. (571 aa)
VPS11Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family. (941 aa)
PPP1CASerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (330 aa)
VDAC2Voltage-dependent anion-selective channel protein 2 isoform X1. (294 aa)
PPEF1Serine/threonine-protein phosphatase. (519 aa)
VPS18Vacuolar protein sorting-associated protein 18 homolog. (895 aa)
NBR1Next to BRCA1 gene 1 protein. (948 aa)
STX17Syntaxin-17; Belongs to the syntaxin family. (302 aa)
USP15Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (981 aa)
LOC102737595Small ubiquitin-related modifier. (95 aa)
ATG5Autophagy protein 5; Involved in autophagic vesicle formation. (255 aa)
GABARAPGamma-aminobutyric acid receptor-associated protein. (117 aa)
PINK1Serine/threonine-protein kinase PINK1, mitochondrial. (488 aa)
MUL1Mitochondrial ubiquitin ligase activator of NFKB 1. (352 aa)
BAK1Bcl-2 homologous antagonist/killer. (211 aa)
PPP1CCSerine/threonine-protein phosphatase; Belongs to the PPP phosphatase family. (337 aa)
ATG12Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family. (140 aa)
UBE2NUbiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family. (152 aa)
SUMO1Small ubiquitin-related modifier. (101 aa)
PPP4CSerine/threonine-protein phosphatase. (307 aa)
SRCTyrosine-protein kinase. (536 aa)
PTENPhosphatase and tensin homolog; Tumor suppressor. Acts as a dual-specificity protein phosphatase, dephosphorylating tyrosine-, serine- and threonine- phosphorylated proteins. Also acts as a lipid phosphatase. Belongs to the PTEN phosphatase protein family. (403 aa)
USP33Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family. (904 aa)
VPS16Vacuolar protein sorting-associated protein 16 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS16 family. (839 aa)
PPP2CBSerine/threonine-protein phosphatase. (308 aa)
FOXO3Forkhead box protein O3. (672 aa)
TFEBTranscription factor EB. (329 aa)
SUMO2Small ubiquitin-related modifier. (95 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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