STRINGSTRING
EPYC EPYC CSPG4 CSPG4 F11R F11R THBD THBD OCLN OCLN VWF VWF SMOC1 SMOC1 CDH13 CDH13 SLC17A8 SLC17A8 TJP1 TJP1 FGF10 FGF10 CLDN5 CLDN5
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EPYCEpiphycan. (321 aa)
CSPG4Chondroitin sulfate proteoglycan 4. (2302 aa)
F11RJunctional adhesion molecule A. (298 aa)
THBDThrombomodulin. (577 aa)
OCLNOccludin. (271 aa)
VWFVon Willebrand factor. (2285 aa)
SMOC1SPARC-related modular calcium-binding protein 1. (410 aa)
CDH13Cadherin-13-like. (512 aa)
SLC17A8Vesicular glutamate transporter 3. (308 aa)
TJP1Tight junction protein ZO-1 isoform X1; Belongs to the MAGUK family. (1770 aa)
FGF10Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (218 aa)
CLDN5Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (309 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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