STRINGSTRING
LOC102736735 LOC102736735 NPAS4 NPAS4 CLOCK CLOCK ARNT2 ARNT2 PDE8A PDE8A KCNH4 KCNH4 HIF1A HIF1A PER1 PER1 LOC102740735 LOC102740735 AHR AHR KCNH3 KCNH3 ARNT ARNT EPAS1 EPAS1 NCOA1 NCOA1 KCNH1 KCNH1 NCOA3 NCOA3 HIF3A HIF3A ARNTL ARNTL NPAS1 NPAS1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102736735PAS domain-containing serine/threonine-protein kinase-like. (414 aa)
NPAS4Neuronal PAS domain-containing protein 4. (800 aa)
CLOCKLOW QUALITY PROTEIN: clock circadian regulator. (846 aa)
ARNT2Aryl hydrocarbon receptor nuclear translocator 2. (628 aa)
PDE8AHigh affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A. (142 aa)
KCNH4Potassium voltage-gated channel subfamily H member 4. (1017 aa)
HIF1AHypoxia-inducible factor 1-alpha isoform X1. (823 aa)
PER1Period circadian protein homolog 1. (1287 aa)
LOC102740735Single-minded homolog 1-like. (389 aa)
AHRAryl hydrocarbon receptor. (843 aa)
KCNH3Potassium voltage-gated channel subfamily H member 3. (1083 aa)
ARNTAryl hydrocarbon receptor nuclear translocator isoform X1. (786 aa)
EPAS1Endothelial PAS domain-containing protein 1. (865 aa)
NCOA1Nuclear receptor coactivator. (1441 aa)
KCNH1Potassium voltage-gated channel subfamily H member 1-like. (638 aa)
NCOA3Nuclear receptor coactivator 3-like. (1154 aa)
HIF3AHypoxia-inducible factor 3-alpha isoform X1. (669 aa)
ARNTLAryl hydrocarbon receptor nuclear translocator-like protein 1 isoform X5. (583 aa)
NPAS1Neuronal PAS domain-containing protein 1 isoform X1. (593 aa)
Your Current Organism:
Leptonychotes weddellii
NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal
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