46 items (Leptonychotes weddellii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GTF2F2	General transcription factor IIF subunit 2. (239 aa)
	TBPL2	TATA box-binding protein-like protein 2. (344 aa)
	TAF11	Transcription initiation factor TFIID subunit 11 isoform X1. (211 aa)
	TAF9B	Transcription initiation factor TFIID subunit 9B. (250 aa)
	LOC102732412	52 kDa repressor of the inhibitor of the protein kinase-like. (150 aa)
	CCNH	cyclin-H-like; Belongs to the cyclin family. (344 aa)
	ING3	Inhibitor of growth protein. (418 aa)
	ERI3	ERI1 exoribonuclease 3 isoform X1. (337 aa)
	SGSM3	Small G protein signaling modulator 3. (750 aa)
	MNAT1	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (309 aa)
	TAF7	Transcription initiation factor TFIID subunit 7. (349 aa)
	GTF2E2	Transcription initiation factor IIE subunit beta. (240 aa)
	GTF2E1	General transcription factor IIE subunit 1. (438 aa)
	CLSPN	Claspin isoform X1. (1340 aa)
	TAF15	TATA-binding protein-associated factor 2N-like. (312 aa)
	ING4	Inhibitor of growth protein. (249 aa)
	LOC102745331	Transcription initiation factor TFIID subunit 8-like. (269 aa)
	ING5	Inhibitor of growth protein. (240 aa)
	LOC102734839	D-2-hydroxyglutarate dehydrogenase, mitochondrial-like. (149 aa)
	ING2	Inhibitor of growth protein. (280 aa)
	ERCC3	TFIIH basal transcription factor complex helicase XPB subunit. (782 aa)
	TBPL1	TATA box-binding protein-like protein 1. (186 aa)
	GTF2H1	General transcription factor IIH subunit 1. (441 aa)
	PRKRIR	52 kDa repressor of the inhibitor of the protein kinase. (186 aa)
	GTF2A1L	TFIIA-alpha and beta-like factor isoform X1. (477 aa)
	TBP	TATA-box-binding protein. (322 aa)
	TAF4	Transcription initiation factor TFIID subunit 4. (668 aa)
	GTF2I	General transcription factor II-I. (992 aa)
	LOC102743422	Negative elongation factor D-like. (572 aa)
	LOC102747306	hemK methyltransferase family member 2-like isoform X1. (214 aa)
	TAF13	Transcription initiation factor TFIID subunit 13. (124 aa)
	TAF3	Transcription initiation factor TFIID subunit 3. (774 aa)
	GTF2H3	General transcription factor IIH subunit 3. (162 aa)
	TAF5L	annotation not available (589 aa)
	TAF12	Transcription initiation factor TFIID subunit 12 isoform X1. (161 aa)
	GTF2H5	General transcription factor IIH subunit 5. (71 aa)
	GTF2H2	General transcription factor IIH subunit. (395 aa)
	TAF9	Transcription initiation factor TFIID subunit 9-like isoform X1. (265 aa)
	ERCC2	TFIIH basal transcription factor complex helicase XPD subunit. (661 aa)
	LOC102733461	F-box/WD repeat-containing protein 12-like. (474 aa)
	CDK20	Cyclin-dependent kinase 20 isoform X1; Belongs to the protein kinase superfamily. (346 aa)
	TAF6	Transcription initiation factor TFIID subunit 6 isoform X1. (677 aa)
	ZSWIM3	Zinc finger SWIM domain-containing protein 3. (627 aa)
	GTF2B	Transcription initiation factor IIB. (316 aa)
	ZSWIM1	Zinc finger SWIM domain-containing protein 1. (456 aa)
	STYX	Serine/threonine/tyrosine-interacting protein. (223 aa)

Your Current Organism:

Leptonychotes weddellii

NCBI taxonomy Id: 9713
Other names: L. weddellii, Leptonychotes weddelli, Weddell seal

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CCNH	CDK20	A0A2U3X8Q5	A0A2U3XPZ1	cyclin-H-like; Belongs to the cyclin family.	Cyclin-dependent kinase 20 isoform X1; Belongs to the protein kinase superfamily.	0.964
CCNH	ERCC2	A0A2U3X8Q5	A0A2U3Y4Q8	cyclin-H-like; Belongs to the cyclin family.	TFIIH basal transcription factor complex helicase XPD subunit.	0.992
CCNH	ERCC3	A0A2U3X8Q5	A0A2U3YTS7	cyclin-H-like; Belongs to the cyclin family.	TFIIH basal transcription factor complex helicase XPB subunit.	0.985
CCNH	GTF2A1L	A0A2U3X8Q5	A0A2U3YM50	cyclin-H-like; Belongs to the cyclin family.	TFIIA-alpha and beta-like factor isoform X1.	0.842
CCNH	GTF2B	A0A2U3X8Q5	A0A2U3Y4G1	cyclin-H-like; Belongs to the cyclin family.	Transcription initiation factor IIB.	0.920
CCNH	GTF2E1	A0A2U3X8Q5	A0A2U3XKM4	cyclin-H-like; Belongs to the cyclin family.	General transcription factor IIE subunit 1.	0.990
CCNH	GTF2E2	A0A2U3X8Q5	A0A2U3XJP0	cyclin-H-like; Belongs to the cyclin family.	Transcription initiation factor IIE subunit beta.	0.989
CCNH	GTF2F2	A0A2U3X8Q5	A0A2U3XXU2	cyclin-H-like; Belongs to the cyclin family.	General transcription factor IIF subunit 2.	0.883
CCNH	GTF2H1	A0A2U3X8Q5	A0A2U3YSU7	cyclin-H-like; Belongs to the cyclin family.	General transcription factor IIH subunit 1.	0.988
CCNH	GTF2H2	A0A2U3X8Q5	A0A2U3Y5C4	cyclin-H-like; Belongs to the cyclin family.	General transcription factor IIH subunit.	0.983
CCNH	GTF2H3	A0A2U3X8Q5	A0A2U3Y9S3	cyclin-H-like; Belongs to the cyclin family.	General transcription factor IIH subunit 3.	0.996
CCNH	GTF2H5	A0A2U3X8Q5	A0A2U3Y694	cyclin-H-like; Belongs to the cyclin family.	General transcription factor IIH subunit 5.	0.969
CCNH	LOC102733461	A0A2U3X8Q5	A0A2U3XPU1	cyclin-H-like; Belongs to the cyclin family.	F-box/WD repeat-containing protein 12-like.	0.964
CCNH	LOC102745331	A0A2U3X8Q5	A0A2U3Z771	cyclin-H-like; Belongs to the cyclin family.	Transcription initiation factor TFIID subunit 8-like.	0.548
CCNH	MNAT1	A0A2U3X8Q5	A0A2U3XF64	cyclin-H-like; Belongs to the cyclin family.	CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.	0.999
CCNH	TAF11	A0A2U3X8Q5	A0A2U3Y072	cyclin-H-like; Belongs to the cyclin family.	Transcription initiation factor TFIID subunit 11 isoform X1.	0.835
CCNH	TAF12	A0A2U3X8Q5	A0A2U3Y8A6	cyclin-H-like; Belongs to the cyclin family.	Transcription initiation factor TFIID subunit 12 isoform X1.	0.808
CCNH	TAF13	A0A2U3X8Q5	A0A2U3YEH9	cyclin-H-like; Belongs to the cyclin family.	Transcription initiation factor TFIID subunit 13.	0.823
CCNH	TAF3	A0A2U3X8Q5	A0A2U3YCC7	cyclin-H-like; Belongs to the cyclin family.	Transcription initiation factor TFIID subunit 3.	0.789
CCNH	TAF4	A0A2U3X8Q5	A0A2U3YLT4	cyclin-H-like; Belongs to the cyclin family.	Transcription initiation factor TFIID subunit 4.	0.802