12 items (Tursiops truncatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	FANCF	Fanconi anemia group F protein. (373 aa)
	FANCL	E3 ubiquitin-protein ligase FANCL isoform X1. (375 aa)
	FANCA	Fanconi anemia group A protein isoform X1. (1445 aa)
	FANCC	Fanconi anemia group C protein homolog; DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability. Upon IFNG induction, may facilitate STAT1 activation by recruiting STAT1 to IFNGR1. (562 aa)
	FAAP100	FA core complex associated protein 100. (725 aa)
	FANCD2	Fanconi anemia group D2 protein isoform X2. (1450 aa)
	FANCI	FA complementation group I. (1319 aa)
	FANCE	Fanconi anemia group E protein isoform X1. (541 aa)
	UBE2T	Ubiquitin-conjugating enzyme E2 T isoform X3; Belongs to the ubiquitin-conjugating enzyme family. (196 aa)
	FANCB	Fanconi anemia group B protein. (861 aa)
	FAAP24	Fanconi anemia core complex-associated protein 24 isoform X1. (214 aa)
	FANCG	Fanconi anemia group G protein isoform X1. (585 aa)

Your Current Organism:

Tursiops truncatus

NCBI taxonomy Id: 9739
Other names: Atlantic bottlenose dolphin, T. truncatus, bottle-nosed dolphin, common bottlenose dolphin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FAAP100	FAAP24	ENSTTRP00000006093	ENSTTRP00000011587	FA core complex associated protein 100.	Fanconi anemia core complex-associated protein 24 isoform X1.	0.999
FAAP100	FANCA	ENSTTRP00000006093	ENSTTRP00000004164	FA core complex associated protein 100.	Fanconi anemia group A protein isoform X1.	0.999
FAAP100	FANCB	ENSTTRP00000006093	ENSTTRP00000011526	FA core complex associated protein 100.	Fanconi anemia group B protein.	0.999
FAAP100	FANCC	ENSTTRP00000006093	ENSTTRP00000005822	FA core complex associated protein 100.	Fanconi anemia group C protein homolog; DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability. Upon IFNG induction, may facilitate STAT1 activation by recruiting STAT1 to IFNGR1.	0.999
FAAP100	FANCD2	ENSTTRP00000006093	ENSTTRP00000007148	FA core complex associated protein 100.	Fanconi anemia group D2 protein isoform X2.	0.997
FAAP100	FANCE	ENSTTRP00000006093	ENSTTRP00000008930	FA core complex associated protein 100.	Fanconi anemia group E protein isoform X1.	0.962
FAAP100	FANCF	ENSTTRP00000006093	ENSTTRP00000000844	FA core complex associated protein 100.	Fanconi anemia group F protein.	0.999
FAAP100	FANCG	ENSTTRP00000006093	ENSTTRP00000016523	FA core complex associated protein 100.	Fanconi anemia group G protein isoform X1.	0.999
FAAP100	FANCI	ENSTTRP00000006093	ENSTTRP00000008389	FA core complex associated protein 100.	FA complementation group I.	0.989
FAAP100	FANCL	ENSTTRP00000006093	ENSTTRP00000001031	FA core complex associated protein 100.	E3 ubiquitin-protein ligase FANCL isoform X1.	0.999
FAAP100	UBE2T	ENSTTRP00000006093	ENSTTRP00000010656	FA core complex associated protein 100.	Ubiquitin-conjugating enzyme E2 T isoform X3; Belongs to the ubiquitin-conjugating enzyme family.	0.996
FAAP24	FAAP100	ENSTTRP00000011587	ENSTTRP00000006093	Fanconi anemia core complex-associated protein 24 isoform X1.	FA core complex associated protein 100.	0.999
FAAP24	FANCA	ENSTTRP00000011587	ENSTTRP00000004164	Fanconi anemia core complex-associated protein 24 isoform X1.	Fanconi anemia group A protein isoform X1.	0.999
FAAP24	FANCB	ENSTTRP00000011587	ENSTTRP00000011526	Fanconi anemia core complex-associated protein 24 isoform X1.	Fanconi anemia group B protein.	0.999
FAAP24	FANCC	ENSTTRP00000011587	ENSTTRP00000005822	Fanconi anemia core complex-associated protein 24 isoform X1.	Fanconi anemia group C protein homolog; DNA repair protein that may operate in a postreplication repair or a cell cycle checkpoint function. May be implicated in interstrand DNA cross-link repair and in the maintenance of normal chromosome stability. Upon IFNG induction, may facilitate STAT1 activation by recruiting STAT1 to IFNGR1.	0.986
FAAP24	FANCD2	ENSTTRP00000011587	ENSTTRP00000007148	Fanconi anemia core complex-associated protein 24 isoform X1.	Fanconi anemia group D2 protein isoform X2.	0.970
FAAP24	FANCE	ENSTTRP00000011587	ENSTTRP00000008930	Fanconi anemia core complex-associated protein 24 isoform X1.	Fanconi anemia group E protein isoform X1.	0.924
FAAP24	FANCF	ENSTTRP00000011587	ENSTTRP00000000844	Fanconi anemia core complex-associated protein 24 isoform X1.	Fanconi anemia group F protein.	0.996
FAAP24	FANCG	ENSTTRP00000011587	ENSTTRP00000016523	Fanconi anemia core complex-associated protein 24 isoform X1.	Fanconi anemia group G protein isoform X1.	0.999
FAAP24	FANCI	ENSTTRP00000011587	ENSTTRP00000008389	Fanconi anemia core complex-associated protein 24 isoform X1.	FA complementation group I.	0.971